Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32348 | 97267;97268;97269 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
N2AB | 30707 | 92344;92345;92346 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
N2A | 29780 | 89563;89564;89565 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
N2B | 23283 | 70072;70073;70074 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
Novex-1 | 23408 | 70447;70448;70449 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
Novex-2 | 23475 | 70648;70649;70650 | chr2:178542812;178542811;178542810 | chr2:179407539;179407538;179407537 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.222 | 0.076 | 0.18274738541 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.318 | likely_benign | 0.2666 | benign | 0.053 | Stabilizing | 0.035 | N | 0.483 | neutral | None | None | None | None | N |
R/C | 0.2619 | likely_benign | 0.2213 | benign | -0.268 | Destabilizing | 0.935 | D | 0.48 | neutral | None | None | None | None | N |
R/D | 0.6392 | likely_pathogenic | 0.5892 | pathogenic | -0.256 | Destabilizing | 0.149 | N | 0.467 | neutral | None | None | None | None | N |
R/E | 0.3423 | ambiguous | 0.3076 | benign | -0.217 | Destabilizing | 0.035 | N | 0.492 | neutral | None | None | None | None | N |
R/F | 0.5421 | ambiguous | 0.4914 | ambiguous | -0.289 | Destabilizing | 0.791 | D | 0.473 | neutral | None | None | None | None | N |
R/G | 0.2303 | likely_benign | 0.1813 | benign | -0.078 | Destabilizing | 0.117 | N | 0.505 | neutral | N | 0.461679448 | None | None | N |
R/H | 0.1265 | likely_benign | 0.1165 | benign | -0.566 | Destabilizing | 0.555 | D | 0.474 | neutral | None | None | None | None | N |
R/I | 0.2426 | likely_benign | 0.2241 | benign | 0.348 | Stabilizing | 0.484 | N | 0.479 | neutral | N | 0.471549725 | None | None | N |
R/K | 0.0837 | likely_benign | 0.0718 | benign | -0.156 | Destabilizing | None | N | 0.222 | neutral | N | 0.392990154 | None | None | N |
R/L | 0.217 | likely_benign | 0.1886 | benign | 0.348 | Stabilizing | 0.149 | N | 0.505 | neutral | None | None | None | None | N |
R/M | 0.2458 | likely_benign | 0.2143 | benign | -0.098 | Destabilizing | 0.791 | D | 0.464 | neutral | None | None | None | None | N |
R/N | 0.5207 | ambiguous | 0.4636 | ambiguous | -0.101 | Destabilizing | 0.149 | N | 0.493 | neutral | None | None | None | None | N |
R/P | 0.3696 | ambiguous | 0.2921 | benign | 0.267 | Stabilizing | 0.555 | D | 0.459 | neutral | None | None | None | None | N |
R/Q | 0.1075 | likely_benign | 0.0976 | benign | -0.12 | Destabilizing | 0.081 | N | 0.53 | neutral | None | None | None | None | N |
R/S | 0.4281 | ambiguous | 0.3734 | ambiguous | -0.269 | Destabilizing | 0.062 | N | 0.514 | neutral | N | 0.430316392 | None | None | N |
R/T | 0.2005 | likely_benign | 0.174 | benign | -0.128 | Destabilizing | 0.117 | N | 0.515 | neutral | N | 0.436762361 | None | None | N |
R/V | 0.2839 | likely_benign | 0.2604 | benign | 0.267 | Stabilizing | 0.38 | N | 0.433 | neutral | None | None | None | None | N |
R/W | 0.2076 | likely_benign | 0.1736 | benign | -0.493 | Destabilizing | 0.935 | D | 0.532 | neutral | None | None | None | None | N |
R/Y | 0.435 | ambiguous | 0.3892 | ambiguous | -0.082 | Destabilizing | 0.791 | D | 0.483 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.