Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32351 | 97276;97277;97278 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
N2AB | 30710 | 92353;92354;92355 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
N2A | 29783 | 89572;89573;89574 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
N2B | 23286 | 70081;70082;70083 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
Novex-1 | 23411 | 70456;70457;70458 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
Novex-2 | 23478 | 70657;70658;70659 | chr2:178542803;178542802;178542801 | chr2:179407530;179407529;179407528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs879109633 | None | 0.722 | N | 0.438 | 0.228 | 0.230578612272 | gnomAD-4.0.0 | 3.18245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71661E-06 | 0 | 0 |
E/K | rs727504879 | 0.789 | 0.722 | N | 0.4 | 0.19 | 0.17948927462 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
E/K | rs727504879 | 0.789 | 0.722 | N | 0.4 | 0.19 | 0.17948927462 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs727504879 | 0.789 | 0.722 | N | 0.4 | 0.19 | 0.17948927462 | gnomAD-4.0.0 | 8.05613E-06 | None | None | None | None | N | None | 1.33518E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32382E-06 | 0 | 1.60102E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.188 | likely_benign | 0.2007 | benign | 0.047 | Stabilizing | 0.722 | D | 0.423 | neutral | N | 0.477199822 | None | None | N |
E/C | 0.8768 | likely_pathogenic | 0.8889 | pathogenic | -0.213 | Destabilizing | 0.996 | D | 0.592 | neutral | None | None | None | None | N |
E/D | 0.0889 | likely_benign | 0.0914 | benign | -0.419 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.406857089 | None | None | N |
E/F | 0.8414 | likely_pathogenic | 0.8474 | pathogenic | -0.037 | Destabilizing | 0.987 | D | 0.532 | neutral | None | None | None | None | N |
E/G | 0.1517 | likely_benign | 0.168 | benign | -0.039 | Destabilizing | 0.722 | D | 0.438 | neutral | N | 0.441623024 | None | None | N |
E/H | 0.4992 | ambiguous | 0.5169 | ambiguous | 0.581 | Stabilizing | 0.987 | D | 0.417 | neutral | None | None | None | None | N |
E/I | 0.5184 | ambiguous | 0.5281 | ambiguous | 0.213 | Stabilizing | 0.961 | D | 0.53 | neutral | None | None | None | None | N |
E/K | 0.2126 | likely_benign | 0.2359 | benign | 0.403 | Stabilizing | 0.722 | D | 0.4 | neutral | N | 0.462750444 | None | None | N |
E/L | 0.5023 | ambiguous | 0.5132 | ambiguous | 0.213 | Stabilizing | 0.961 | D | 0.528 | neutral | None | None | None | None | N |
E/M | 0.6011 | likely_pathogenic | 0.6101 | pathogenic | -0.02 | Destabilizing | 0.996 | D | 0.507 | neutral | None | None | None | None | N |
E/N | 0.239 | likely_benign | 0.2579 | benign | 0.159 | Stabilizing | 0.633 | D | 0.401 | neutral | None | None | None | None | N |
E/P | 0.3105 | likely_benign | 0.3395 | benign | 0.174 | Stabilizing | 0.961 | D | 0.415 | neutral | None | None | None | None | N |
E/Q | 0.1781 | likely_benign | 0.189 | benign | 0.165 | Stabilizing | 0.722 | D | 0.369 | neutral | N | 0.470716566 | None | None | N |
E/R | 0.3359 | likely_benign | 0.3703 | ambiguous | 0.582 | Stabilizing | 0.961 | D | 0.42 | neutral | None | None | None | None | N |
E/S | 0.1796 | likely_benign | 0.1933 | benign | 0.05 | Stabilizing | 0.633 | D | 0.403 | neutral | None | None | None | None | N |
E/T | 0.2629 | likely_benign | 0.2778 | benign | 0.134 | Stabilizing | 0.775 | D | 0.389 | neutral | None | None | None | None | N |
E/V | 0.3337 | likely_benign | 0.3424 | ambiguous | 0.174 | Stabilizing | 0.949 | D | 0.457 | neutral | N | 0.45664362 | None | None | N |
E/W | 0.9152 | likely_pathogenic | 0.9177 | pathogenic | -0.026 | Destabilizing | 0.996 | D | 0.616 | neutral | None | None | None | None | N |
E/Y | 0.7087 | likely_pathogenic | 0.7201 | pathogenic | 0.172 | Stabilizing | 0.987 | D | 0.483 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.