Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32356 | 97291;97292;97293 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
N2AB | 30715 | 92368;92369;92370 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
N2A | 29788 | 89587;89588;89589 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
N2B | 23291 | 70096;70097;70098 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
Novex-1 | 23416 | 70471;70472;70473 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
Novex-2 | 23483 | 70672;70673;70674 | chr2:178542788;178542787;178542786 | chr2:179407515;179407514;179407513 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs368184712 | -0.617 | 0.994 | N | 0.553 | 0.471 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/A | rs368184712 | -0.617 | 0.994 | N | 0.553 | 0.471 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/A | rs368184712 | -0.617 | 0.994 | N | 0.553 | 0.471 | None | gnomAD-4.0.0 | 1.42533E-05 | None | None | None | None | N | None | 0 | 0 | None | 3.37861E-05 | 0 | None | 0 | 0 | 1.77999E-05 | 0 | 1.60118E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1545 | likely_benign | 0.1373 | benign | -0.546 | Destabilizing | 0.994 | D | 0.553 | neutral | N | 0.48874862 | None | None | N |
E/C | 0.8332 | likely_pathogenic | 0.7867 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/D | 0.1555 | likely_benign | 0.1384 | benign | -0.7 | Destabilizing | 0.104 | N | 0.159 | neutral | N | 0.440264026 | None | None | N |
E/F | 0.7338 | likely_pathogenic | 0.6854 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/G | 0.2151 | likely_benign | 0.1793 | benign | -0.816 | Destabilizing | 0.994 | D | 0.594 | neutral | N | 0.519591602 | None | None | N |
E/H | 0.414 | ambiguous | 0.367 | ambiguous | -0.681 | Destabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
E/I | 0.3427 | ambiguous | 0.3072 | benign | 0.153 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/K | 0.1886 | likely_benign | 0.1658 | benign | -0.275 | Destabilizing | 0.994 | D | 0.475 | neutral | N | 0.458983073 | None | None | N |
E/L | 0.437 | ambiguous | 0.3808 | ambiguous | 0.153 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/M | 0.4354 | ambiguous | 0.3882 | ambiguous | 0.503 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/N | 0.2815 | likely_benign | 0.2523 | benign | -0.461 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
E/P | 0.9181 | likely_pathogenic | 0.9048 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Q | 0.1292 | likely_benign | 0.1167 | benign | -0.397 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.485959031 | None | None | N |
E/R | 0.2924 | likely_benign | 0.2603 | benign | -0.12 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
E/S | 0.1977 | likely_benign | 0.1786 | benign | -0.7 | Destabilizing | 0.992 | D | 0.474 | neutral | None | None | None | None | N |
E/T | 0.1858 | likely_benign | 0.1633 | benign | -0.495 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.208 | likely_benign | 0.1878 | benign | -0.059 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.486305747 | None | None | N |
E/W | 0.8926 | likely_pathogenic | 0.8609 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Y | 0.6586 | likely_pathogenic | 0.5959 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.