Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32379 | 97360;97361;97362 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
N2AB | 30738 | 92437;92438;92439 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
N2A | 29811 | 89656;89657;89658 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
N2B | 23314 | 70165;70166;70167 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
Novex-1 | 23439 | 70540;70541;70542 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
Novex-2 | 23506 | 70741;70742;70743 | chr2:178542719;178542718;178542717 | chr2:179407446;179407445;179407444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1361697291 | -1.724 | 1.0 | N | 0.841 | 0.387 | 0.406945738958 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29634E-04 | 0 |
L/F | rs1361697291 | -1.724 | 1.0 | N | 0.841 | 0.387 | 0.406945738958 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1361697291 | -1.724 | 1.0 | N | 0.841 | 0.387 | 0.406945738958 | gnomAD-4.0.0 | 6.08986E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.2296E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8701 | likely_pathogenic | 0.8077 | pathogenic | -2.468 | Highly Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
L/C | 0.8634 | likely_pathogenic | 0.8296 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9991 | pathogenic | -2.636 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/E | 0.995 | likely_pathogenic | 0.9919 | pathogenic | -2.388 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.6195 | likely_pathogenic | 0.4845 | ambiguous | -1.476 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.453071995 | None | None | N |
L/G | 0.9855 | likely_pathogenic | 0.9762 | pathogenic | -3.047 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/H | 0.9893 | likely_pathogenic | 0.9831 | pathogenic | -2.544 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.472697187 | None | None | N |
L/I | 0.1464 | likely_benign | 0.1234 | benign | -0.788 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.452090733 | None | None | N |
L/K | 0.9911 | likely_pathogenic | 0.987 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.2312 | likely_benign | 0.2004 | benign | -0.932 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/N | 0.9957 | likely_pathogenic | 0.9939 | pathogenic | -2.207 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9937 | likely_pathogenic | 0.9903 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.472697187 | None | None | N |
L/Q | 0.9774 | likely_pathogenic | 0.9662 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/R | 0.9799 | likely_pathogenic | 0.9687 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.886 | deleterious | N | 0.472697187 | None | None | N |
L/S | 0.9887 | likely_pathogenic | 0.9801 | pathogenic | -2.97 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/T | 0.9319 | likely_pathogenic | 0.8962 | pathogenic | -2.557 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/V | 0.1516 | likely_benign | 0.1268 | benign | -1.328 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | N | 0.446279482 | None | None | N |
L/W | 0.9472 | likely_pathogenic | 0.9045 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/Y | 0.9657 | likely_pathogenic | 0.9428 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.