Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32381 | 97366;97367;97368 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
N2AB | 30740 | 92443;92444;92445 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
N2A | 29813 | 89662;89663;89664 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
N2B | 23316 | 70171;70172;70173 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
Novex-1 | 23441 | 70546;70547;70548 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
Novex-2 | 23508 | 70747;70748;70749 | chr2:178542713;178542712;178542711 | chr2:179407440;179407439;179407438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.984 | N | 0.757 | 0.261 | 0.479286488449 | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99481E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6469 | likely_pathogenic | 0.5442 | ambiguous | -2.112 | Highly Destabilizing | 0.702 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/C | 0.7674 | likely_pathogenic | 0.6956 | pathogenic | -1.625 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
L/D | 0.9984 | likely_pathogenic | 0.9972 | pathogenic | -1.779 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.9914 | likely_pathogenic | 0.9853 | pathogenic | -1.738 | Destabilizing | 0.988 | D | 0.821 | deleterious | None | None | None | None | N |
L/F | 0.8189 | likely_pathogenic | 0.7207 | pathogenic | -1.572 | Destabilizing | 0.984 | D | 0.764 | deleterious | D | 0.530576599 | None | None | N |
L/G | 0.9195 | likely_pathogenic | 0.8631 | pathogenic | -2.491 | Highly Destabilizing | 0.988 | D | 0.82 | deleterious | None | None | None | None | N |
L/H | 0.9879 | likely_pathogenic | 0.9796 | pathogenic | -1.705 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
L/I | 0.1853 | likely_benign | 0.1551 | benign | -1.111 | Destabilizing | 0.702 | D | 0.601 | neutral | None | None | None | None | N |
L/K | 0.9904 | likely_pathogenic | 0.9859 | pathogenic | -1.501 | Destabilizing | 0.988 | D | 0.798 | deleterious | None | None | None | None | N |
L/M | 0.2812 | likely_benign | 0.2114 | benign | -0.958 | Destabilizing | 0.984 | D | 0.757 | deleterious | N | 0.487209824 | None | None | N |
L/N | 0.9838 | likely_pathogenic | 0.9767 | pathogenic | -1.412 | Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
L/P | 0.9962 | likely_pathogenic | 0.9937 | pathogenic | -1.416 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
L/Q | 0.9605 | likely_pathogenic | 0.9339 | pathogenic | -1.577 | Destabilizing | 0.996 | D | 0.787 | deleterious | None | None | None | None | N |
L/R | 0.9775 | likely_pathogenic | 0.9662 | pathogenic | -0.911 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
L/S | 0.9505 | likely_pathogenic | 0.9059 | pathogenic | -2.099 | Highly Destabilizing | 0.984 | D | 0.784 | deleterious | N | 0.51181748 | None | None | N |
L/T | 0.8194 | likely_pathogenic | 0.7441 | pathogenic | -1.929 | Destabilizing | 0.919 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/V | 0.1468 | likely_benign | 0.1256 | benign | -1.416 | Destabilizing | 0.011 | N | 0.306 | neutral | N | 0.392272504 | None | None | N |
L/W | 0.9737 | likely_pathogenic | 0.9533 | pathogenic | -1.656 | Destabilizing | 0.999 | D | 0.765 | deleterious | D | 0.530923316 | None | None | N |
L/Y | 0.9727 | likely_pathogenic | 0.9548 | pathogenic | -1.431 | Destabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.