Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32391 | 97396;97397;97398 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
N2AB | 30750 | 92473;92474;92475 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
N2A | 29823 | 89692;89693;89694 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
N2B | 23326 | 70201;70202;70203 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
Novex-1 | 23451 | 70576;70577;70578 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
Novex-2 | 23518 | 70777;70778;70779 | chr2:178542683;178542682;178542681 | chr2:179407410;179407409;179407408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1353755396 | 0.055 | 0.166 | N | 0.523 | 0.16 | 0.296329037015 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1353755396 | 0.055 | 0.166 | N | 0.523 | 0.16 | 0.296329037015 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1353755396 | 0.055 | 0.166 | N | 0.523 | 0.16 | 0.296329037015 | gnomAD-4.0.0 | 4.33914E-06 | None | None | None | None | N | None | 1.33583E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08718E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0821 | likely_benign | 0.0755 | benign | -0.671 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.491692924 | None | None | N |
T/C | 0.3255 | likely_benign | 0.311 | benign | -0.427 | Destabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | N |
T/D | 0.3115 | likely_benign | 0.2821 | benign | -0.223 | Destabilizing | 0.39 | N | 0.562 | neutral | None | None | None | None | N |
T/E | 0.2412 | likely_benign | 0.2297 | benign | -0.248 | Destabilizing | 0.39 | N | 0.569 | neutral | None | None | None | None | N |
T/F | 0.255 | likely_benign | 0.2106 | benign | -0.87 | Destabilizing | 0.818 | D | 0.655 | neutral | None | None | None | None | N |
T/G | 0.2055 | likely_benign | 0.1902 | benign | -0.9 | Destabilizing | 0.39 | N | 0.583 | neutral | None | None | None | None | N |
T/H | 0.2069 | likely_benign | 0.1847 | benign | -1.254 | Destabilizing | 0.901 | D | 0.631 | neutral | None | None | None | None | N |
T/I | 0.112 | likely_benign | 0.1044 | benign | -0.164 | Destabilizing | 0.166 | N | 0.523 | neutral | N | 0.514012423 | None | None | N |
T/K | 0.1391 | likely_benign | 0.1272 | benign | -0.692 | Destabilizing | 0.004 | N | 0.27 | neutral | None | None | None | None | N |
T/L | 0.1015 | likely_benign | 0.088 | benign | -0.164 | Destabilizing | 0.004 | N | 0.231 | neutral | None | None | None | None | N |
T/M | 0.0788 | likely_benign | 0.0748 | benign | 0.132 | Stabilizing | 0.818 | D | 0.6 | neutral | None | None | None | None | N |
T/N | 0.0973 | likely_benign | 0.0899 | benign | -0.573 | Destabilizing | 0.003 | N | 0.287 | neutral | N | 0.485748387 | None | None | N |
T/P | 0.1414 | likely_benign | 0.1172 | benign | -0.301 | Destabilizing | 0.873 | D | 0.616 | neutral | N | 0.520285035 | None | None | N |
T/Q | 0.1731 | likely_benign | 0.1654 | benign | -0.774 | Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | N |
T/R | 0.1372 | likely_benign | 0.1166 | benign | -0.441 | Destabilizing | 0.39 | N | 0.587 | neutral | None | None | None | None | N |
T/S | 0.1067 | likely_benign | 0.1001 | benign | -0.81 | Destabilizing | 0.166 | N | 0.433 | neutral | N | 0.440744029 | None | None | N |
T/V | 0.0948 | likely_benign | 0.0938 | benign | -0.301 | Destabilizing | 0.002 | N | 0.147 | neutral | None | None | None | None | N |
T/W | 0.5751 | likely_pathogenic | 0.523 | ambiguous | -0.818 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
T/Y | 0.2656 | likely_benign | 0.2269 | benign | -0.576 | Destabilizing | 0.965 | D | 0.649 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.