Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32392 | 97399;97400;97401 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
N2AB | 30751 | 92476;92477;92478 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
N2A | 29824 | 89695;89696;89697 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
N2B | 23327 | 70204;70205;70206 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
Novex-1 | 23452 | 70579;70580;70581 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
Novex-2 | 23519 | 70780;70781;70782 | chr2:178542680;178542679;178542678 | chr2:179407407;179407406;179407405 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.942 | N | 0.779 | 0.638 | 0.809007091605 | gnomAD-4.0.0 | 2.05352E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.97199E-05 |
I/T | None | None | 0.822 | N | 0.758 | 0.46 | 0.709166840936 | gnomAD-4.0.0 | 6.84507E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.999E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9019 | likely_pathogenic | 0.8336 | pathogenic | -2.676 | Highly Destabilizing | 0.754 | D | 0.667 | neutral | None | None | None | None | N |
I/C | 0.9005 | likely_pathogenic | 0.8697 | pathogenic | -2.129 | Highly Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
I/D | 0.9985 | likely_pathogenic | 0.9969 | pathogenic | -3.261 | Highly Destabilizing | 0.993 | D | 0.832 | deleterious | None | None | None | None | N |
I/E | 0.9937 | likely_pathogenic | 0.9872 | pathogenic | -2.986 | Highly Destabilizing | 0.978 | D | 0.831 | deleterious | None | None | None | None | N |
I/F | 0.3448 | ambiguous | 0.2612 | benign | -1.594 | Destabilizing | 0.942 | D | 0.677 | prob.neutral | D | 0.524901421 | None | None | N |
I/G | 0.9857 | likely_pathogenic | 0.9735 | pathogenic | -3.282 | Highly Destabilizing | 0.978 | D | 0.822 | deleterious | None | None | None | None | N |
I/H | 0.9838 | likely_pathogenic | 0.9686 | pathogenic | -2.873 | Highly Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
I/K | 0.9843 | likely_pathogenic | 0.9708 | pathogenic | -2.266 | Highly Destabilizing | 0.956 | D | 0.821 | deleterious | None | None | None | None | N |
I/L | 0.1682 | likely_benign | 0.1321 | benign | -0.9 | Destabilizing | 0.125 | N | 0.426 | neutral | N | 0.473643094 | None | None | N |
I/M | 0.2129 | likely_benign | 0.1591 | benign | -0.922 | Destabilizing | 0.489 | N | 0.451 | neutral | N | 0.501812483 | None | None | N |
I/N | 0.9766 | likely_pathogenic | 0.9604 | pathogenic | -2.772 | Highly Destabilizing | 0.97 | D | 0.835 | deleterious | N | 0.513675767 | None | None | N |
I/P | 0.9953 | likely_pathogenic | 0.9912 | pathogenic | -1.476 | Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | N |
I/Q | 0.9807 | likely_pathogenic | 0.9657 | pathogenic | -2.534 | Highly Destabilizing | 0.978 | D | 0.835 | deleterious | None | None | None | None | N |
I/R | 0.9717 | likely_pathogenic | 0.9463 | pathogenic | -2.081 | Highly Destabilizing | 0.956 | D | 0.828 | deleterious | None | None | None | None | N |
I/S | 0.963 | likely_pathogenic | 0.9373 | pathogenic | -3.454 | Highly Destabilizing | 0.942 | D | 0.779 | deleterious | N | 0.512661809 | None | None | N |
I/T | 0.9382 | likely_pathogenic | 0.8951 | pathogenic | -3.014 | Highly Destabilizing | 0.822 | D | 0.758 | deleterious | N | 0.489442219 | None | None | N |
I/V | 0.1044 | likely_benign | 0.0926 | benign | -1.476 | Destabilizing | 0.006 | N | 0.194 | neutral | N | 0.477048759 | None | None | N |
I/W | 0.9535 | likely_pathogenic | 0.9276 | pathogenic | -2.062 | Highly Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
I/Y | 0.8888 | likely_pathogenic | 0.8385 | pathogenic | -1.768 | Destabilizing | 0.978 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.