Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32394 | 97405;97406;97407 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
N2AB | 30753 | 92482;92483;92484 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
N2A | 29826 | 89701;89702;89703 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
N2B | 23329 | 70210;70211;70212 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
Novex-1 | 23454 | 70585;70586;70587 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
Novex-2 | 23521 | 70786;70787;70788 | chr2:178542674;178542673;178542672 | chr2:179407401;179407400;179407399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.942 | N | 0.821 | 0.356 | 0.676591352999 | gnomAD-4.0.0 | 6.8456E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99969E-07 | 0 | 0 |
V/I | None | None | 0.014 | N | 0.23 | 0.049 | 0.377976839388 | gnomAD-4.0.0 | 3.4228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9078 | likely_pathogenic | 0.8756 | pathogenic | -2.167 | Highly Destabilizing | 0.822 | D | 0.603 | neutral | N | 0.471766269 | None | None | N |
V/C | 0.9494 | likely_pathogenic | 0.9319 | pathogenic | -1.553 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -3.218 | Highly Destabilizing | 0.99 | D | 0.855 | deleterious | N | 0.498771294 | None | None | N |
V/E | 0.9926 | likely_pathogenic | 0.9915 | pathogenic | -2.92 | Highly Destabilizing | 0.993 | D | 0.848 | deleterious | None | None | None | None | N |
V/F | 0.6147 | likely_pathogenic | 0.5403 | ambiguous | -1.251 | Destabilizing | 0.942 | D | 0.821 | deleterious | N | 0.497503847 | None | None | N |
V/G | 0.9246 | likely_pathogenic | 0.9097 | pathogenic | -2.752 | Highly Destabilizing | 0.971 | D | 0.859 | deleterious | N | 0.487414989 | None | None | N |
V/H | 0.9963 | likely_pathogenic | 0.9952 | pathogenic | -2.746 | Highly Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
V/I | 0.0816 | likely_benign | 0.078 | benign | -0.48 | Destabilizing | 0.014 | N | 0.23 | neutral | N | 0.476047815 | None | None | N |
V/K | 0.9939 | likely_pathogenic | 0.9934 | pathogenic | -1.833 | Destabilizing | 0.978 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.3698 | ambiguous | 0.3256 | benign | -0.48 | Destabilizing | 0.247 | N | 0.576 | neutral | N | 0.481031482 | None | None | N |
V/M | 0.4884 | ambiguous | 0.405 | ambiguous | -0.634 | Destabilizing | 0.956 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/N | 0.9859 | likely_pathogenic | 0.9829 | pathogenic | -2.452 | Highly Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | None | None | N |
V/P | 0.992 | likely_pathogenic | 0.99 | pathogenic | -1.022 | Destabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | N |
V/Q | 0.9927 | likely_pathogenic | 0.9913 | pathogenic | -2.126 | Highly Destabilizing | 0.993 | D | 0.854 | deleterious | None | None | None | None | N |
V/R | 0.9912 | likely_pathogenic | 0.9903 | pathogenic | -1.876 | Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.9804 | likely_pathogenic | 0.9729 | pathogenic | -2.941 | Highly Destabilizing | 0.978 | D | 0.839 | deleterious | None | None | None | None | N |
V/T | 0.9365 | likely_pathogenic | 0.9186 | pathogenic | -2.495 | Highly Destabilizing | 0.86 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/W | 0.9919 | likely_pathogenic | 0.9884 | pathogenic | -1.916 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.9628 | likely_pathogenic | 0.9484 | pathogenic | -1.522 | Destabilizing | 0.978 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.