Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32401 | 97426;97427;97428 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
N2AB | 30760 | 92503;92504;92505 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
N2A | 29833 | 89722;89723;89724 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
N2B | 23336 | 70231;70232;70233 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
Novex-1 | 23461 | 70606;70607;70608 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
Novex-2 | 23528 | 70807;70808;70809 | chr2:178542555;178542554;178542553 | chr2:179407282;179407281;179407280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1371025709 | -0.866 | 0.999 | N | 0.859 | 0.437 | 0.499218193508 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 6.48E-05 | 5.86E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/R | rs1371025709 | -0.866 | 0.999 | N | 0.859 | 0.437 | 0.499218193508 | gnomAD-4.0.0 | 2.76105E-06 | None | None | None | None | N | None | 3.01823E-05 | 4.52489E-05 | None | 0 | 0 | None | 0 | 0 | 9.0688E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2459 | likely_benign | 0.227 | benign | -0.875 | Destabilizing | 0.884 | D | 0.369 | neutral | N | 0.498737479 | None | None | N |
G/C | 0.5307 | ambiguous | 0.4591 | ambiguous | -1.256 | Destabilizing | 1.0 | D | 0.864 | deleterious | N | 0.512121701 | None | None | N |
G/D | 0.6318 | likely_pathogenic | 0.5848 | pathogenic | -2.066 | Highly Destabilizing | 0.64 | D | 0.41 | neutral | N | 0.480949416 | None | None | N |
G/E | 0.6774 | likely_pathogenic | 0.6115 | pathogenic | -2.099 | Highly Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
G/F | 0.8703 | likely_pathogenic | 0.8377 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/H | 0.8518 | likely_pathogenic | 0.8103 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/I | 0.7836 | likely_pathogenic | 0.7184 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
G/K | 0.8745 | likely_pathogenic | 0.8322 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/L | 0.6974 | likely_pathogenic | 0.6415 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
G/M | 0.788 | likely_pathogenic | 0.7396 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
G/N | 0.6593 | likely_pathogenic | 0.6248 | pathogenic | -1.164 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/P | 0.986 | likely_pathogenic | 0.9807 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/Q | 0.7403 | likely_pathogenic | 0.6896 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/R | 0.8153 | likely_pathogenic | 0.7547 | pathogenic | -0.972 | Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.511107743 | None | None | N |
G/S | 0.1758 | likely_benign | 0.1653 | benign | -1.354 | Destabilizing | 0.992 | D | 0.555 | neutral | N | 0.499764463 | None | None | N |
G/T | 0.4466 | ambiguous | 0.4122 | ambiguous | -1.324 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
G/V | 0.6675 | likely_pathogenic | 0.5939 | pathogenic | -0.572 | Destabilizing | 0.999 | D | 0.831 | deleterious | N | 0.511614722 | None | None | N |
G/W | 0.8545 | likely_pathogenic | 0.8132 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/Y | 0.8293 | likely_pathogenic | 0.7829 | pathogenic | -1.153 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.