Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32402 | 97429;97430;97431 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
N2AB | 30761 | 92506;92507;92508 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
N2A | 29834 | 89725;89726;89727 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
N2B | 23337 | 70234;70235;70236 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
Novex-1 | 23462 | 70609;70610;70611 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
Novex-2 | 23529 | 70810;70811;70812 | chr2:178542552;178542551;178542550 | chr2:179407279;179407278;179407277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.704 | N | 0.685 | 0.36 | 0.424549175451 | gnomAD-4.0.0 | 6.89587E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.17195E-05 | 0 |
P/R | rs761156054 | -0.456 | 0.996 | N | 0.73 | 0.368 | None | gnomAD-2.1.1 | 2.18E-05 | None | None | None | None | I | None | 0 | 2.86E-05 | None | 0 | 0 | None | 3.38E-05 | None | 0 | 3.18E-05 | 0 |
P/R | rs761156054 | -0.456 | 0.996 | N | 0.73 | 0.368 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
P/R | rs761156054 | -0.456 | 0.996 | N | 0.73 | 0.368 | None | gnomAD-4.0.0 | 1.68515E-05 | None | None | None | None | I | None | 0 | 1.67802E-05 | None | 0 | 0 | None | 0 | 4.97347E-04 | 1.62169E-05 | 2.21852E-05 | 3.23217E-05 |
P/S | rs764632520 | -1.441 | 0.959 | N | 0.697 | 0.338 | 0.250039746154 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs764632520 | -1.441 | 0.959 | N | 0.697 | 0.338 | 0.250039746154 | gnomAD-4.0.0 | 2.0691E-06 | None | None | None | None | I | None | 3.01386E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81261E-06 | 0 | 0 |
P/T | rs764632520 | -1.398 | 0.92 | N | 0.683 | 0.313 | None | gnomAD-2.1.1 | 2.18E-05 | None | None | None | None | I | None | 0 | 2.86E-05 | None | 0 | 0 | None | 3.38E-05 | None | 0 | 3.18E-05 | 0 |
P/T | rs764632520 | -1.398 | 0.92 | N | 0.683 | 0.313 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
P/T | rs764632520 | -1.398 | 0.92 | N | 0.683 | 0.313 | None | gnomAD-4.0.0 | 1.68537E-05 | None | None | None | None | I | None | 0 | 1.67791E-05 | None | 0 | 0 | None | 0 | 4.97183E-04 | 1.622E-05 | 2.21921E-05 | 3.23206E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1062 | likely_benign | 0.0895 | benign | -1.409 | Destabilizing | 0.826 | D | 0.68 | prob.neutral | N | 0.497631022 | None | None | I |
P/C | 0.5263 | ambiguous | 0.4254 | ambiguous | -1.058 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
P/D | 0.7504 | likely_pathogenic | 0.6808 | pathogenic | -1.562 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/E | 0.3747 | ambiguous | 0.3128 | benign | -1.619 | Destabilizing | 0.997 | D | 0.688 | prob.neutral | None | None | None | None | I |
P/F | 0.5507 | ambiguous | 0.4317 | ambiguous | -1.413 | Destabilizing | 0.991 | D | 0.762 | deleterious | None | None | None | None | I |
P/G | 0.5651 | likely_pathogenic | 0.475 | ambiguous | -1.649 | Destabilizing | 0.99 | D | 0.739 | prob.delet. | None | None | None | None | I |
P/H | 0.3545 | ambiguous | 0.2721 | benign | -1.14 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | I |
P/I | 0.2159 | likely_benign | 0.1621 | benign | -0.868 | Destabilizing | 0.17 | N | 0.583 | neutral | None | None | None | None | I |
P/K | 0.3613 | ambiguous | 0.2877 | benign | -1.036 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/L | 0.153 | likely_benign | 0.1129 | benign | -0.868 | Destabilizing | 0.704 | D | 0.685 | prob.neutral | N | 0.512059249 | None | None | I |
P/M | 0.2934 | likely_benign | 0.2247 | benign | -0.615 | Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | I |
P/N | 0.5669 | likely_pathogenic | 0.473 | ambiguous | -0.835 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/Q | 0.2153 | likely_benign | 0.1622 | benign | -1.144 | Destabilizing | 0.996 | D | 0.669 | neutral | N | 0.506071768 | None | None | I |
P/R | 0.2931 | likely_benign | 0.2151 | benign | -0.441 | Destabilizing | 0.996 | D | 0.73 | prob.delet. | N | 0.512819717 | None | None | I |
P/S | 0.2311 | likely_benign | 0.1844 | benign | -1.274 | Destabilizing | 0.959 | D | 0.697 | prob.neutral | N | 0.487371628 | None | None | I |
P/T | 0.1746 | likely_benign | 0.137 | benign | -1.236 | Destabilizing | 0.92 | D | 0.683 | prob.neutral | N | 0.480383416 | None | None | I |
P/V | 0.1775 | likely_benign | 0.1346 | benign | -1.015 | Destabilizing | 0.079 | N | 0.503 | neutral | None | None | None | None | I |
P/W | 0.8124 | likely_pathogenic | 0.7086 | pathogenic | -1.504 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
P/Y | 0.5779 | likely_pathogenic | 0.4701 | ambiguous | -1.207 | Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.