Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32404 | 97435;97436;97437 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
N2AB | 30763 | 92512;92513;92514 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
N2A | 29836 | 89731;89732;89733 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
N2B | 23339 | 70240;70241;70242 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
Novex-1 | 23464 | 70615;70616;70617 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
Novex-2 | 23531 | 70816;70817;70818 | chr2:178542546;178542545;178542544 | chr2:179407273;179407272;179407271 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs752957686 | 0.243 | None | N | 0.295 | 0.107 | 0.132336055621 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
T/I | rs752957686 | 0.243 | None | N | 0.295 | 0.107 | 0.132336055621 | gnomAD-4.0.0 | 2.75297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61901E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0713 | likely_benign | 0.0653 | benign | -0.684 | Destabilizing | 0.012 | N | 0.413 | neutral | N | 0.475986313 | None | None | N |
T/C | 0.2347 | likely_benign | 0.2257 | benign | -0.451 | Destabilizing | 0.824 | D | 0.585 | neutral | None | None | None | None | N |
T/D | 0.3912 | ambiguous | 0.3463 | ambiguous | -0.361 | Destabilizing | 0.081 | N | 0.587 | neutral | None | None | None | None | N |
T/E | 0.2234 | likely_benign | 0.2007 | benign | -0.322 | Destabilizing | 0.081 | N | 0.566 | neutral | None | None | None | None | N |
T/F | 0.2302 | likely_benign | 0.1914 | benign | -0.547 | Destabilizing | 0.38 | N | 0.681 | prob.neutral | None | None | None | None | N |
T/G | 0.19 | likely_benign | 0.1777 | benign | -0.993 | Destabilizing | 0.081 | N | 0.565 | neutral | None | None | None | None | N |
T/H | 0.2159 | likely_benign | 0.1903 | benign | -1.345 | Destabilizing | 0.824 | D | 0.658 | neutral | None | None | None | None | N |
T/I | 0.1017 | likely_benign | 0.0852 | benign | 0.059 | Stabilizing | None | N | 0.295 | neutral | N | 0.468325413 | None | None | N |
T/K | 0.0999 | likely_benign | 0.0946 | benign | -0.874 | Destabilizing | 0.062 | N | 0.581 | neutral | N | 0.45738191 | None | None | N |
T/L | 0.0805 | likely_benign | 0.0728 | benign | 0.059 | Stabilizing | 0.012 | N | 0.392 | neutral | None | None | None | None | N |
T/M | 0.0854 | likely_benign | 0.0784 | benign | 0.172 | Stabilizing | 0.38 | N | 0.581 | neutral | None | None | None | None | N |
T/N | 0.1345 | likely_benign | 0.1193 | benign | -0.861 | Destabilizing | 0.081 | N | 0.589 | neutral | None | None | None | None | N |
T/P | 0.3911 | ambiguous | 0.304 | benign | -0.155 | Destabilizing | 0.317 | N | 0.643 | neutral | N | 0.455747114 | None | None | N |
T/Q | 0.1553 | likely_benign | 0.1424 | benign | -0.887 | Destabilizing | 0.38 | N | 0.612 | neutral | None | None | None | None | N |
T/R | 0.0934 | likely_benign | 0.0818 | benign | -0.796 | Destabilizing | 0.317 | N | 0.623 | neutral | N | 0.495572152 | None | None | N |
T/S | 0.1049 | likely_benign | 0.0968 | benign | -1.075 | Destabilizing | None | N | 0.263 | neutral | N | 0.45634176 | None | None | N |
T/V | 0.0787 | likely_benign | 0.0713 | benign | -0.155 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
T/W | 0.5974 | likely_pathogenic | 0.5244 | ambiguous | -0.582 | Destabilizing | 0.935 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/Y | 0.2857 | likely_benign | 0.2493 | benign | -0.338 | Destabilizing | 0.555 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.