Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3240697441;97442;97443 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
N2AB3076592518;92519;92520 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
N2A2983889737;89738;89739 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
N2B2334170246;70247;70248 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
Novex-12346670621;70622;70623 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
Novex-22353370822;70823;70824 chr2:178542540;178542539;178542538chr2:179407267;179407266;179407265
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCT
  • RefSeq wild type template codon: GGA
  • Domain: Fn3-124
  • Domain position: 8
  • Structural Position: 8
  • Q(SASA): 0.6845
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/L rs1469824341 0.078 0.999 N 0.749 0.434 0.616575112523 gnomAD-2.1.1 4.07E-06 None None None None I None 0 0 None 0 0 None 3.32E-05 None 0 0 0
P/L rs1469824341 0.078 0.999 N 0.749 0.434 0.616575112523 gnomAD-4.0.0 1.61253E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.44275E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.2964 likely_benign 0.2204 benign -0.426 Destabilizing 0.996 D 0.642 neutral N 0.499121052 None None I
P/C 0.784 likely_pathogenic 0.6625 pathogenic -0.77 Destabilizing 1.0 D 0.783 deleterious None None None None I
P/D 0.6225 likely_pathogenic 0.5708 pathogenic -0.214 Destabilizing 1.0 D 0.819 deleterious None None None None I
P/E 0.4877 ambiguous 0.4226 ambiguous -0.313 Destabilizing 1.0 D 0.811 deleterious None None None None I
P/F 0.8351 likely_pathogenic 0.7245 pathogenic -0.618 Destabilizing 1.0 D 0.765 deleterious None None None None I
P/G 0.642 likely_pathogenic 0.558 ambiguous -0.537 Destabilizing 1.0 D 0.722 prob.delet. None None None None I
P/H 0.5251 ambiguous 0.4048 ambiguous -0.024 Destabilizing 1.0 D 0.75 deleterious D 0.529026139 None None I
P/I 0.6517 likely_pathogenic 0.5362 ambiguous -0.274 Destabilizing 0.999 D 0.793 deleterious None None None None I
P/K 0.5555 ambiguous 0.469 ambiguous -0.444 Destabilizing 1.0 D 0.82 deleterious None None None None I
P/L 0.4016 ambiguous 0.2901 benign -0.274 Destabilizing 0.999 D 0.749 deleterious N 0.507938781 None None I
P/M 0.6196 likely_pathogenic 0.4966 ambiguous -0.541 Destabilizing 1.0 D 0.748 deleterious None None None None I
P/N 0.6038 likely_pathogenic 0.5133 ambiguous -0.269 Destabilizing 1.0 D 0.777 deleterious None None None None I
P/Q 0.4492 ambiguous 0.3378 benign -0.459 Destabilizing 1.0 D 0.795 deleterious None None None None I
P/R 0.4829 ambiguous 0.3618 ambiguous 0.023 Stabilizing 0.999 D 0.791 deleterious N 0.520125369 None None I
P/S 0.4293 ambiguous 0.3246 benign -0.624 Destabilizing 0.998 D 0.752 deleterious N 0.506869733 None None I
P/T 0.3337 likely_benign 0.2483 benign -0.622 Destabilizing 0.884 D 0.344 neutral N 0.502919713 None None I
P/V 0.518 ambiguous 0.408 ambiguous -0.293 Destabilizing 0.999 D 0.717 prob.delet. None None None None I
P/W 0.9243 likely_pathogenic 0.8674 pathogenic -0.689 Destabilizing 1.0 D 0.773 deleterious None None None None I
P/Y 0.8004 likely_pathogenic 0.6876 pathogenic -0.411 Destabilizing 1.0 D 0.759 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.