Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32406 | 97441;97442;97443 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
N2AB | 30765 | 92518;92519;92520 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
N2A | 29838 | 89737;89738;89739 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
N2B | 23341 | 70246;70247;70248 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
Novex-1 | 23466 | 70621;70622;70623 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
Novex-2 | 23533 | 70822;70823;70824 | chr2:178542540;178542539;178542538 | chr2:179407267;179407266;179407265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1469824341 | 0.078 | 0.999 | N | 0.749 | 0.434 | 0.616575112523 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
P/L | rs1469824341 | 0.078 | 0.999 | N | 0.749 | 0.434 | 0.616575112523 | gnomAD-4.0.0 | 1.61253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2964 | likely_benign | 0.2204 | benign | -0.426 | Destabilizing | 0.996 | D | 0.642 | neutral | N | 0.499121052 | None | None | I |
P/C | 0.784 | likely_pathogenic | 0.6625 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
P/D | 0.6225 | likely_pathogenic | 0.5708 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/E | 0.4877 | ambiguous | 0.4226 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
P/F | 0.8351 | likely_pathogenic | 0.7245 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/G | 0.642 | likely_pathogenic | 0.558 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
P/H | 0.5251 | ambiguous | 0.4048 | ambiguous | -0.024 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.529026139 | None | None | I |
P/I | 0.6517 | likely_pathogenic | 0.5362 | ambiguous | -0.274 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
P/K | 0.5555 | ambiguous | 0.469 | ambiguous | -0.444 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
P/L | 0.4016 | ambiguous | 0.2901 | benign | -0.274 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.507938781 | None | None | I |
P/M | 0.6196 | likely_pathogenic | 0.4966 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/N | 0.6038 | likely_pathogenic | 0.5133 | ambiguous | -0.269 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/Q | 0.4492 | ambiguous | 0.3378 | benign | -0.459 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/R | 0.4829 | ambiguous | 0.3618 | ambiguous | 0.023 | Stabilizing | 0.999 | D | 0.791 | deleterious | N | 0.520125369 | None | None | I |
P/S | 0.4293 | ambiguous | 0.3246 | benign | -0.624 | Destabilizing | 0.998 | D | 0.752 | deleterious | N | 0.506869733 | None | None | I |
P/T | 0.3337 | likely_benign | 0.2483 | benign | -0.622 | Destabilizing | 0.884 | D | 0.344 | neutral | N | 0.502919713 | None | None | I |
P/V | 0.518 | ambiguous | 0.408 | ambiguous | -0.293 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/W | 0.9243 | likely_pathogenic | 0.8674 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/Y | 0.8004 | likely_pathogenic | 0.6876 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.