Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32413 | 97462;97463;97464 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
N2AB | 30772 | 92539;92540;92541 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
N2A | 29845 | 89758;89759;89760 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
N2B | 23348 | 70267;70268;70269 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
Novex-1 | 23473 | 70642;70643;70644 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
Novex-2 | 23540 | 70843;70844;70845 | chr2:178542519;178542518;178542517 | chr2:179407246;179407245;179407244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1695055645 | None | 0.822 | N | 0.471 | 0.255 | 0.139678290688 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30924E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1695055645 | None | 0.822 | N | 0.471 | 0.255 | 0.139678290688 | gnomAD-4.0.0 | 1.31453E-05 | None | None | None | None | N | None | 0 | 1.30924E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4586 | ambiguous | 0.3998 | ambiguous | -0.266 | Destabilizing | 0.698 | D | 0.445 | neutral | N | 0.433888975 | None | None | N |
D/C | 0.7692 | likely_pathogenic | 0.7166 | pathogenic | 0.063 | Stabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
D/E | 0.3717 | ambiguous | 0.3224 | benign | -0.702 | Destabilizing | 0.014 | N | 0.229 | neutral | N | 0.435793129 | None | None | N |
D/F | 0.8365 | likely_pathogenic | 0.7904 | pathogenic | -0.628 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
D/G | 0.2797 | likely_benign | 0.26 | benign | -0.52 | Destabilizing | 0.822 | D | 0.471 | neutral | N | 0.424805345 | None | None | N |
D/H | 0.6123 | likely_pathogenic | 0.5421 | ambiguous | -0.98 | Destabilizing | 0.992 | D | 0.533 | neutral | N | 0.443393892 | None | None | N |
D/I | 0.7937 | likely_pathogenic | 0.7439 | pathogenic | 0.367 | Stabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/K | 0.7999 | likely_pathogenic | 0.7624 | pathogenic | 0.007 | Stabilizing | 0.754 | D | 0.493 | neutral | None | None | None | None | N |
D/L | 0.6783 | likely_pathogenic | 0.6255 | pathogenic | 0.367 | Stabilizing | 0.956 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/M | 0.8293 | likely_pathogenic | 0.7824 | pathogenic | 0.827 | Stabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
D/N | 0.144 | likely_benign | 0.13 | benign | -0.25 | Destabilizing | 0.822 | D | 0.471 | neutral | N | 0.414820424 | None | None | N |
D/P | 0.9743 | likely_pathogenic | 0.9693 | pathogenic | 0.18 | Stabilizing | 0.978 | D | 0.571 | neutral | None | None | None | None | N |
D/Q | 0.7254 | likely_pathogenic | 0.6627 | pathogenic | -0.197 | Destabilizing | 0.915 | D | 0.558 | neutral | None | None | None | None | N |
D/R | 0.8267 | likely_pathogenic | 0.7787 | pathogenic | -0.13 | Destabilizing | 0.956 | D | 0.625 | neutral | None | None | None | None | N |
D/S | 0.1957 | likely_benign | 0.1746 | benign | -0.431 | Destabilizing | 0.356 | N | 0.261 | neutral | None | None | None | None | N |
D/T | 0.3214 | likely_benign | 0.2845 | benign | -0.222 | Destabilizing | 0.754 | D | 0.492 | neutral | None | None | None | None | N |
D/V | 0.6128 | likely_pathogenic | 0.5611 | ambiguous | 0.18 | Stabilizing | 0.942 | D | 0.687 | prob.neutral | N | 0.467713547 | None | None | N |
D/W | 0.9727 | likely_pathogenic | 0.9653 | pathogenic | -0.685 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
D/Y | 0.5771 | likely_pathogenic | 0.5216 | ambiguous | -0.429 | Destabilizing | 0.997 | D | 0.669 | neutral | N | 0.460806217 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.