Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32415 | 97468;97469;97470 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
N2AB | 30774 | 92545;92546;92547 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
N2A | 29847 | 89764;89765;89766 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
N2B | 23350 | 70273;70274;70275 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
Novex-1 | 23475 | 70648;70649;70650 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
Novex-2 | 23542 | 70849;70850;70851 | chr2:178542513;178542512;178542511 | chr2:179407240;179407239;179407238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs768529940 | -0.323 | 0.007 | N | 0.263 | 0.274 | 0.401753679984 | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 1.40964E-04 |
T/I | rs768529940 | -0.323 | 0.007 | N | 0.263 | 0.274 | 0.401753679984 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.1425E-04 | 0 |
T/I | rs768529940 | -0.323 | 0.007 | N | 0.263 | 0.274 | 0.401753679984 | gnomAD-4.0.0 | 7.44529E-06 | None | None | None | None | N | None | 1.33561E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09825E-04 | 1.60298E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.074 | likely_benign | 0.0677 | benign | -0.642 | Destabilizing | 0.101 | N | 0.294 | neutral | N | 0.52191147 | None | None | N |
T/C | 0.3435 | ambiguous | 0.2768 | benign | -0.436 | Destabilizing | 0.983 | D | 0.359 | neutral | None | None | None | None | N |
T/D | 0.2972 | likely_benign | 0.2655 | benign | -0.821 | Destabilizing | 0.264 | N | 0.386 | neutral | None | None | None | None | N |
T/E | 0.2791 | likely_benign | 0.2601 | benign | -0.867 | Destabilizing | 0.418 | N | 0.385 | neutral | None | None | None | None | N |
T/F | 0.2634 | likely_benign | 0.1972 | benign | -1.153 | Destabilizing | 0.836 | D | 0.447 | neutral | None | None | None | None | N |
T/G | 0.1768 | likely_benign | 0.1467 | benign | -0.803 | Destabilizing | 0.129 | N | 0.339 | neutral | None | None | None | None | N |
T/H | 0.2354 | likely_benign | 0.1989 | benign | -1.248 | Destabilizing | 0.716 | D | 0.387 | neutral | None | None | None | None | N |
T/I | 0.2274 | likely_benign | 0.1808 | benign | -0.317 | Destabilizing | 0.007 | N | 0.263 | neutral | N | 0.516347296 | None | None | N |
T/K | 0.2778 | likely_benign | 0.2391 | benign | -0.533 | Destabilizing | 0.213 | N | 0.386 | neutral | N | 0.473199799 | None | None | N |
T/L | 0.1187 | likely_benign | 0.0954 | benign | -0.317 | Destabilizing | 0.129 | N | 0.356 | neutral | None | None | None | None | N |
T/M | 0.1015 | likely_benign | 0.0903 | benign | 0.237 | Stabilizing | 0.061 | N | 0.337 | neutral | None | None | None | None | N |
T/N | 0.0905 | likely_benign | 0.0785 | benign | -0.517 | Destabilizing | 0.001 | N | 0.069 | neutral | None | None | None | None | N |
T/P | 0.5274 | ambiguous | 0.3973 | ambiguous | -0.397 | Destabilizing | 0.794 | D | 0.435 | neutral | N | 0.505497969 | None | None | N |
T/Q | 0.2222 | likely_benign | 0.1935 | benign | -0.898 | Destabilizing | 0.716 | D | 0.43 | neutral | None | None | None | None | N |
T/R | 0.2505 | likely_benign | 0.2003 | benign | -0.171 | Destabilizing | 0.655 | D | 0.445 | neutral | N | 0.510443682 | None | None | N |
T/S | 0.078 | likely_benign | 0.071 | benign | -0.664 | Destabilizing | 0.007 | N | 0.157 | neutral | N | 0.45512633 | None | None | N |
T/V | 0.1584 | likely_benign | 0.1249 | benign | -0.397 | Destabilizing | 0.01 | N | 0.109 | neutral | None | None | None | None | N |
T/W | 0.656 | likely_pathogenic | 0.5583 | ambiguous | -1.106 | Destabilizing | 0.983 | D | 0.408 | neutral | None | None | None | None | N |
T/Y | 0.267 | likely_benign | 0.2199 | benign | -0.802 | Destabilizing | 0.94 | D | 0.417 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.