Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32418 | 97477;97478;97479 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
N2AB | 30777 | 92554;92555;92556 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
N2A | 29850 | 89773;89774;89775 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
N2B | 23353 | 70282;70283;70284 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
Novex-1 | 23478 | 70657;70658;70659 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
Novex-2 | 23545 | 70858;70859;70860 | chr2:178542504;178542503;178542502 | chr2:179407231;179407230;179407229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs771893617 | -1.55 | 0.016 | N | 0.466 | 0.098 | 0.173771789658 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.30899E-04 | None | 0 | 0 | 0 |
T/S | rs771893617 | -1.55 | 0.016 | N | 0.466 | 0.098 | 0.173771789658 | gnomAD-4.0.0 | 1.43498E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.29029E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1185 | likely_benign | 0.0972 | benign | -1.188 | Destabilizing | 0.201 | N | 0.523 | neutral | N | 0.485829416 | None | None | N |
T/C | 0.3563 | ambiguous | 0.2828 | benign | -1.258 | Destabilizing | 0.992 | D | 0.599 | neutral | None | None | None | None | N |
T/D | 0.7511 | likely_pathogenic | 0.6952 | pathogenic | -1.903 | Destabilizing | 0.85 | D | 0.621 | neutral | None | None | None | None | N |
T/E | 0.5965 | likely_pathogenic | 0.5441 | ambiguous | -1.749 | Destabilizing | 0.617 | D | 0.603 | neutral | None | None | None | None | N |
T/F | 0.3854 | ambiguous | 0.3143 | benign | -1.048 | Destabilizing | 0.85 | D | 0.615 | neutral | None | None | None | None | N |
T/G | 0.3711 | ambiguous | 0.2911 | benign | -1.53 | Destabilizing | 0.447 | N | 0.571 | neutral | None | None | None | None | N |
T/H | 0.4174 | ambiguous | 0.3559 | ambiguous | -1.684 | Destabilizing | 0.992 | D | 0.61 | neutral | None | None | None | None | N |
T/I | 0.1897 | likely_benign | 0.1633 | benign | -0.316 | Destabilizing | 0.004 | N | 0.417 | neutral | D | 0.524735557 | None | None | N |
T/K | 0.4099 | ambiguous | 0.3811 | ambiguous | -0.792 | Destabilizing | 0.617 | D | 0.601 | neutral | None | None | None | None | N |
T/L | 0.1416 | likely_benign | 0.1138 | benign | -0.316 | Destabilizing | 0.103 | N | 0.505 | neutral | None | None | None | None | N |
T/M | 0.1078 | likely_benign | 0.0896 | benign | -0.367 | Destabilizing | 0.25 | N | 0.473 | neutral | None | None | None | None | N |
T/N | 0.2437 | likely_benign | 0.1956 | benign | -1.399 | Destabilizing | 0.81 | D | 0.603 | neutral | N | 0.473739096 | None | None | N |
T/P | 0.7926 | likely_pathogenic | 0.7913 | pathogenic | -0.576 | Destabilizing | 0.896 | D | 0.619 | neutral | N | 0.519026186 | None | None | N |
T/Q | 0.3725 | ambiguous | 0.3246 | benign | -1.347 | Destabilizing | 0.92 | D | 0.61 | neutral | None | None | None | None | N |
T/R | 0.3541 | ambiguous | 0.3111 | benign | -0.794 | Destabilizing | 0.85 | D | 0.621 | neutral | None | None | None | None | N |
T/S | 0.1536 | likely_benign | 0.1272 | benign | -1.541 | Destabilizing | 0.016 | N | 0.466 | neutral | N | 0.500010471 | None | None | N |
T/V | 0.1403 | likely_benign | 0.1204 | benign | -0.576 | Destabilizing | 0.005 | N | 0.351 | neutral | None | None | None | None | N |
T/W | 0.742 | likely_pathogenic | 0.6774 | pathogenic | -1.172 | Destabilizing | 0.992 | D | 0.648 | neutral | None | None | None | None | N |
T/Y | 0.4384 | ambiguous | 0.3856 | ambiguous | -0.792 | Destabilizing | 0.92 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.