Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32419 | 97480;97481;97482 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
N2AB | 30778 | 92557;92558;92559 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
N2A | 29851 | 89776;89777;89778 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
N2B | 23354 | 70285;70286;70287 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
Novex-1 | 23479 | 70660;70661;70662 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
Novex-2 | 23546 | 70861;70862;70863 | chr2:178542501;178542500;178542499 | chr2:179407228;179407227;179407226 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs746131466 | -1.272 | 0.011 | N | 0.163 | 0.057 | 0.312001716656 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
I/V | rs746131466 | -1.272 | 0.011 | N | 0.163 | 0.057 | 0.312001716656 | gnomAD-4.0.0 | 3.18845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73181E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6879 | likely_pathogenic | 0.6342 | pathogenic | -2.275 | Highly Destabilizing | 0.702 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/C | 0.7632 | likely_pathogenic | 0.7363 | pathogenic | -1.137 | Destabilizing | 0.076 | N | 0.647 | neutral | None | None | None | None | N |
I/D | 0.998 | likely_pathogenic | 0.9975 | pathogenic | -2.687 | Highly Destabilizing | 0.996 | D | 0.939 | deleterious | None | None | None | None | N |
I/E | 0.9958 | likely_pathogenic | 0.995 | pathogenic | -2.36 | Highly Destabilizing | 0.988 | D | 0.935 | deleterious | None | None | None | None | N |
I/F | 0.4595 | ambiguous | 0.3967 | ambiguous | -1.291 | Destabilizing | 0.984 | D | 0.729 | prob.delet. | N | 0.474103588 | None | None | N |
I/G | 0.9677 | likely_pathogenic | 0.9549 | pathogenic | -2.86 | Highly Destabilizing | 0.988 | D | 0.902 | deleterious | None | None | None | None | N |
I/H | 0.9927 | likely_pathogenic | 0.991 | pathogenic | -2.811 | Highly Destabilizing | 0.999 | D | 0.927 | deleterious | None | None | None | None | N |
I/K | 0.9945 | likely_pathogenic | 0.994 | pathogenic | -1.295 | Destabilizing | 0.988 | D | 0.936 | deleterious | None | None | None | None | N |
I/L | 0.132 | likely_benign | 0.1191 | benign | -0.495 | Destabilizing | 0.437 | N | 0.387 | neutral | N | 0.347218848 | None | None | N |
I/M | 0.1688 | likely_benign | 0.1529 | benign | -0.788 | Destabilizing | 0.984 | D | 0.699 | prob.neutral | N | 0.455175589 | None | None | N |
I/N | 0.9755 | likely_pathogenic | 0.9721 | pathogenic | -2.041 | Highly Destabilizing | 0.995 | D | 0.934 | deleterious | N | 0.499221686 | None | None | N |
I/P | 0.9961 | likely_pathogenic | 0.9953 | pathogenic | -1.083 | Destabilizing | 0.996 | D | 0.935 | deleterious | None | None | None | None | N |
I/Q | 0.9899 | likely_pathogenic | 0.9887 | pathogenic | -1.589 | Destabilizing | 0.996 | D | 0.937 | deleterious | None | None | None | None | N |
I/R | 0.9897 | likely_pathogenic | 0.9879 | pathogenic | -1.738 | Destabilizing | 0.996 | D | 0.934 | deleterious | None | None | None | None | N |
I/S | 0.9225 | likely_pathogenic | 0.9058 | pathogenic | -2.447 | Highly Destabilizing | 0.984 | D | 0.871 | deleterious | N | 0.48786538 | None | None | N |
I/T | 0.848 | likely_pathogenic | 0.8202 | pathogenic | -1.952 | Destabilizing | 0.896 | D | 0.766 | deleterious | N | 0.487611891 | None | None | N |
I/V | 0.0779 | likely_benign | 0.0707 | benign | -1.083 | Destabilizing | 0.011 | N | 0.163 | neutral | N | 0.434923551 | None | None | N |
I/W | 0.9922 | likely_pathogenic | 0.9892 | pathogenic | -1.55 | Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
I/Y | 0.9568 | likely_pathogenic | 0.9461 | pathogenic | -1.424 | Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.