Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32420 | 97483;97484;97485 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
N2AB | 30779 | 92560;92561;92562 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
N2A | 29852 | 89779;89780;89781 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
N2B | 23355 | 70288;70289;70290 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
Novex-1 | 23480 | 70663;70664;70665 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
Novex-2 | 23547 | 70864;70865;70866 | chr2:178542498;178542497;178542496 | chr2:179407225;179407224;179407223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1393812138 | None | 1.0 | D | 0.895 | 0.442 | 0.793893798558 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1223 | likely_benign | 0.0872 | benign | -0.79 | Destabilizing | 0.997 | D | 0.461 | neutral | N | 0.48675815 | None | None | N |
S/C | 0.1508 | likely_benign | 0.1119 | benign | -0.604 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.505902817 | None | None | N |
S/D | 0.7452 | likely_pathogenic | 0.6521 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
S/E | 0.7269 | likely_pathogenic | 0.6302 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
S/F | 0.3386 | likely_benign | 0.2434 | benign | -0.69 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.535109887 | None | None | N |
S/G | 0.1516 | likely_benign | 0.1145 | benign | -1.149 | Destabilizing | 0.999 | D | 0.542 | neutral | None | None | None | None | N |
S/H | 0.4318 | ambiguous | 0.3521 | ambiguous | -1.558 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/I | 0.3526 | ambiguous | 0.2546 | benign | 0.101 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/K | 0.7652 | likely_pathogenic | 0.6664 | pathogenic | -0.43 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
S/L | 0.1969 | likely_benign | 0.1395 | benign | 0.101 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/M | 0.2931 | likely_benign | 0.227 | benign | 0.098 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
S/N | 0.3383 | likely_benign | 0.2588 | benign | -0.938 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | N |
S/P | 0.979 | likely_pathogenic | 0.9649 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.546630777 | None | None | N |
S/Q | 0.5799 | likely_pathogenic | 0.491 | ambiguous | -0.814 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
S/R | 0.6611 | likely_pathogenic | 0.5513 | ambiguous | -0.665 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
S/T | 0.101 | likely_benign | 0.0881 | benign | -0.673 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.516078789 | None | None | N |
S/V | 0.3524 | ambiguous | 0.242 | benign | -0.161 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/W | 0.5163 | ambiguous | 0.4333 | ambiguous | -0.893 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
S/Y | 0.3527 | ambiguous | 0.2579 | benign | -0.48 | Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.528526522 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.