Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32422 | 97489;97490;97491 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
N2AB | 30781 | 92566;92567;92568 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
N2A | 29854 | 89785;89786;89787 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
N2B | 23357 | 70294;70295;70296 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
Novex-1 | 23482 | 70669;70670;70671 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
Novex-2 | 23549 | 70870;70871;70872 | chr2:178542492;178542491;178542490 | chr2:179407219;179407218;179407217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1695041603 | None | 0.124 | N | 0.605 | 0.183 | 0.224531998449 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1695041603 | None | 0.124 | N | 0.605 | 0.183 | 0.224531998449 | gnomAD-4.0.0 | 6.57488E-06 | None | None | None | None | N | None | 2.41464E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0995 | likely_benign | 0.1002 | benign | -0.706 | Destabilizing | 0.124 | N | 0.666 | neutral | N | 0.469371003 | None | None | N |
E/C | 0.6206 | likely_pathogenic | 0.5916 | pathogenic | -0.285 | Destabilizing | 0.968 | D | 0.769 | deleterious | None | None | None | None | N |
E/D | 0.0764 | likely_benign | 0.0763 | benign | -0.804 | Destabilizing | 0.001 | N | 0.264 | neutral | N | 0.472247867 | None | None | N |
E/F | 0.5508 | ambiguous | 0.4964 | ambiguous | -0.265 | Destabilizing | 0.89 | D | 0.768 | deleterious | None | None | None | None | N |
E/G | 0.0924 | likely_benign | 0.0929 | benign | -1.02 | Destabilizing | 0.001 | N | 0.407 | neutral | N | 0.516636149 | None | None | N |
E/H | 0.3126 | likely_benign | 0.2752 | benign | -0.388 | Destabilizing | 0.726 | D | 0.621 | neutral | None | None | None | None | N |
E/I | 0.2525 | likely_benign | 0.2244 | benign | 0.13 | Stabilizing | 0.726 | D | 0.774 | deleterious | None | None | None | None | N |
E/K | 0.124 | likely_benign | 0.1084 | benign | -0.221 | Destabilizing | 0.124 | N | 0.605 | neutral | N | 0.462857592 | None | None | N |
E/L | 0.1862 | likely_benign | 0.1766 | benign | 0.13 | Stabilizing | 0.567 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/M | 0.2617 | likely_benign | 0.2455 | benign | 0.44 | Stabilizing | 0.909 | D | 0.771 | deleterious | None | None | None | None | N |
E/N | 0.1123 | likely_benign | 0.1121 | benign | -0.682 | Destabilizing | 0.272 | N | 0.615 | neutral | None | None | None | None | N |
E/P | 0.6714 | likely_pathogenic | 0.6713 | pathogenic | -0.127 | Destabilizing | 0.726 | D | 0.753 | deleterious | None | None | None | None | N |
E/Q | 0.1032 | likely_benign | 0.0958 | benign | -0.579 | Destabilizing | 0.009 | N | 0.259 | neutral | N | 0.466052613 | None | None | N |
E/R | 0.2247 | likely_benign | 0.1945 | benign | 0.042 | Stabilizing | 0.396 | N | 0.625 | neutral | None | None | None | None | N |
E/S | 0.1154 | likely_benign | 0.1149 | benign | -0.914 | Destabilizing | 0.157 | N | 0.587 | neutral | None | None | None | None | N |
E/T | 0.1568 | likely_benign | 0.1508 | benign | -0.655 | Destabilizing | 0.567 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/V | 0.1661 | likely_benign | 0.1474 | benign | -0.127 | Destabilizing | 0.497 | N | 0.741 | deleterious | N | 0.478525262 | None | None | N |
E/W | 0.8224 | likely_pathogenic | 0.7696 | pathogenic | -0.015 | Destabilizing | 0.968 | D | 0.761 | deleterious | None | None | None | None | N |
E/Y | 0.4025 | ambiguous | 0.3519 | ambiguous | -0.007 | Destabilizing | 0.89 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.