Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32430 | 97513;97514;97515 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
N2AB | 30789 | 92590;92591;92592 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
N2A | 29862 | 89809;89810;89811 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
N2B | 23365 | 70318;70319;70320 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
Novex-1 | 23490 | 70693;70694;70695 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
Novex-2 | 23557 | 70894;70895;70896 | chr2:178542468;178542467;178542466 | chr2:179407195;179407194;179407193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.773 | 0.35 | 0.40032279838 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6402 | likely_pathogenic | 0.6587 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
A/D | 0.9612 | likely_pathogenic | 0.9554 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.521116462 | None | None | I |
A/E | 0.9482 | likely_pathogenic | 0.942 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
A/F | 0.7955 | likely_pathogenic | 0.7917 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
A/G | 0.4203 | ambiguous | 0.3938 | ambiguous | -0.966 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.475589242 | None | None | I |
A/H | 0.9123 | likely_pathogenic | 0.9124 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
A/I | 0.7712 | likely_pathogenic | 0.7476 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
A/K | 0.9773 | likely_pathogenic | 0.9757 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
A/L | 0.6469 | likely_pathogenic | 0.6223 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
A/M | 0.6802 | likely_pathogenic | 0.6498 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
A/N | 0.8331 | likely_pathogenic | 0.8252 | pathogenic | -0.598 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
A/P | 0.9777 | likely_pathogenic | 0.9786 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.491741219 | None | None | I |
A/Q | 0.8661 | likely_pathogenic | 0.8641 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
A/R | 0.9439 | likely_pathogenic | 0.9419 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
A/S | 0.1512 | likely_benign | 0.1502 | benign | -0.966 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.417391875 | None | None | I |
A/T | 0.3595 | ambiguous | 0.3258 | benign | -0.915 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.506013724 | None | None | I |
A/V | 0.4951 | ambiguous | 0.4583 | ambiguous | -0.393 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.481963428 | None | None | I |
A/W | 0.9805 | likely_pathogenic | 0.9806 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
A/Y | 0.9057 | likely_pathogenic | 0.9054 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.