Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32431 | 97516;97517;97518 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
N2AB | 30790 | 92593;92594;92595 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
N2A | 29863 | 89812;89813;89814 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
N2B | 23366 | 70321;70322;70323 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
Novex-1 | 23491 | 70696;70697;70698 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
Novex-2 | 23558 | 70897;70898;70899 | chr2:178542465;178542464;178542463 | chr2:179407192;179407191;179407190 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1060500426 | -0.29 | 0.27 | N | 0.509 | 0.325 | 0.44349138644 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 1.16144E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs1060500426 | -0.29 | 0.27 | N | 0.509 | 0.325 | 0.44349138644 | gnomAD-4.0.0 | 7.95834E-06 | None | None | None | None | I | None | 0 | 1.14348E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.27 | N | 0.413 | 0.189 | 0.188950314367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0808 | likely_benign | 0.0677 | benign | -0.474 | Destabilizing | 0.002 | N | 0.14 | neutral | N | 0.488342322 | None | None | I |
P/C | 0.5456 | ambiguous | 0.4428 | ambiguous | -0.524 | Destabilizing | 0.995 | D | 0.458 | neutral | None | None | None | None | I |
P/D | 0.6125 | likely_pathogenic | 0.5497 | ambiguous | -0.132 | Destabilizing | 0.329 | N | 0.445 | neutral | None | None | None | None | I |
P/E | 0.4103 | ambiguous | 0.3573 | ambiguous | -0.246 | Destabilizing | 0.495 | N | 0.45 | neutral | None | None | None | None | I |
P/F | 0.5369 | ambiguous | 0.438 | ambiguous | -0.719 | Destabilizing | 0.944 | D | 0.482 | neutral | None | None | None | None | I |
P/G | 0.3537 | ambiguous | 0.2943 | benign | -0.615 | Destabilizing | 0.329 | N | 0.479 | neutral | None | None | None | None | I |
P/H | 0.2797 | likely_benign | 0.233 | benign | -0.229 | Destabilizing | 0.944 | D | 0.463 | neutral | None | None | None | None | I |
P/I | 0.2565 | likely_benign | 0.2086 | benign | -0.254 | Destabilizing | 0.704 | D | 0.485 | neutral | None | None | None | None | I |
P/K | 0.4692 | ambiguous | 0.3934 | ambiguous | -0.324 | Destabilizing | 0.495 | N | 0.439 | neutral | None | None | None | None | I |
P/L | 0.1347 | likely_benign | 0.1048 | benign | -0.254 | Destabilizing | 0.27 | N | 0.509 | neutral | N | 0.479675854 | None | None | I |
P/M | 0.261 | likely_benign | 0.2151 | benign | -0.255 | Destabilizing | 0.981 | D | 0.458 | neutral | None | None | None | None | I |
P/N | 0.3029 | likely_benign | 0.251 | benign | -0.009 | Destabilizing | 0.013 | N | 0.153 | neutral | None | None | None | None | I |
P/Q | 0.1938 | likely_benign | 0.1674 | benign | -0.258 | Destabilizing | 0.784 | D | 0.492 | neutral | N | 0.479106763 | None | None | I |
P/R | 0.3725 | ambiguous | 0.3009 | benign | 0.163 | Stabilizing | 0.642 | D | 0.499 | neutral | N | 0.466291632 | None | None | I |
P/S | 0.1365 | likely_benign | 0.1153 | benign | -0.405 | Destabilizing | 0.27 | N | 0.413 | neutral | N | 0.506312007 | None | None | I |
P/T | 0.1027 | likely_benign | 0.0856 | benign | -0.415 | Destabilizing | 0.003 | N | 0.144 | neutral | N | 0.472318793 | None | None | I |
P/V | 0.1674 | likely_benign | 0.1385 | benign | -0.292 | Destabilizing | 0.329 | N | 0.481 | neutral | None | None | None | None | I |
P/W | 0.76 | likely_pathogenic | 0.6713 | pathogenic | -0.795 | Destabilizing | 0.995 | D | 0.484 | neutral | None | None | None | None | I |
P/Y | 0.5212 | ambiguous | 0.431 | ambiguous | -0.48 | Destabilizing | 0.981 | D | 0.483 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.