Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32432 | 97519;97520;97521 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
N2AB | 30791 | 92596;92597;92598 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
N2A | 29864 | 89815;89816;89817 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
N2B | 23367 | 70324;70325;70326 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
Novex-1 | 23492 | 70699;70700;70701 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
Novex-2 | 23559 | 70900;70901;70902 | chr2:178542462;178542461;178542460 | chr2:179407189;179407188;179407187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1199606807 | -1.481 | 0.995 | N | 0.813 | 0.418 | 0.799146553086 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.651 | likely_pathogenic | 0.5725 | pathogenic | -2.037 | Highly Destabilizing | 0.825 | D | 0.688 | prob.neutral | None | None | None | None | I |
L/C | 0.713 | likely_pathogenic | 0.6681 | pathogenic | -1.193 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | I |
L/D | 0.9798 | likely_pathogenic | 0.9696 | pathogenic | -1.493 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | I |
L/E | 0.8785 | likely_pathogenic | 0.8413 | pathogenic | -1.46 | Destabilizing | 0.996 | D | 0.809 | deleterious | None | None | None | None | I |
L/F | 0.5296 | ambiguous | 0.4466 | ambiguous | -1.493 | Destabilizing | 0.976 | D | 0.66 | neutral | None | None | None | None | I |
L/G | 0.9258 | likely_pathogenic | 0.8941 | pathogenic | -2.41 | Highly Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | I |
L/H | 0.7897 | likely_pathogenic | 0.7336 | pathogenic | -1.61 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | I |
L/I | 0.0758 | likely_benign | 0.0741 | benign | -1.059 | Destabilizing | 0.015 | N | 0.204 | neutral | None | None | None | None | I |
L/K | 0.7931 | likely_pathogenic | 0.77 | pathogenic | -1.341 | Destabilizing | 0.988 | D | 0.791 | deleterious | None | None | None | None | I |
L/M | 0.2135 | likely_benign | 0.1957 | benign | -0.736 | Destabilizing | 0.968 | D | 0.655 | neutral | N | 0.504186927 | None | None | I |
L/N | 0.8457 | likely_pathogenic | 0.8037 | pathogenic | -1.17 | Destabilizing | 0.996 | D | 0.813 | deleterious | None | None | None | None | I |
L/P | 0.6024 | likely_pathogenic | 0.5233 | ambiguous | -1.356 | Destabilizing | 0.995 | D | 0.813 | deleterious | N | 0.468130008 | None | None | I |
L/Q | 0.6398 | likely_pathogenic | 0.5745 | pathogenic | -1.33 | Destabilizing | 0.995 | D | 0.793 | deleterious | N | 0.468890477 | None | None | I |
L/R | 0.7117 | likely_pathogenic | 0.6689 | pathogenic | -0.738 | Destabilizing | 0.995 | D | 0.794 | deleterious | N | 0.475891916 | None | None | I |
L/S | 0.8186 | likely_pathogenic | 0.7473 | pathogenic | -1.842 | Destabilizing | 0.988 | D | 0.792 | deleterious | None | None | None | None | I |
L/T | 0.5491 | ambiguous | 0.487 | ambiguous | -1.682 | Destabilizing | 0.919 | D | 0.754 | deleterious | None | None | None | None | I |
L/V | 0.0826 | likely_benign | 0.0794 | benign | -1.356 | Destabilizing | 0.046 | N | 0.232 | neutral | N | 0.384780811 | None | None | I |
L/W | 0.8371 | likely_pathogenic | 0.7962 | pathogenic | -1.583 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | I |
L/Y | 0.8339 | likely_pathogenic | 0.792 | pathogenic | -1.372 | Destabilizing | 0.996 | D | 0.748 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.