Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32435 | 97528;97529;97530 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
N2AB | 30794 | 92605;92606;92607 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
N2A | 29867 | 89824;89825;89826 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
N2B | 23370 | 70333;70334;70335 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
Novex-1 | 23495 | 70708;70709;70710 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
Novex-2 | 23562 | 70909;70910;70911 | chr2:178542453;178542452;178542451 | chr2:179407180;179407179;179407178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1248603103 | -1.911 | 1.0 | D | 0.869 | 0.785 | 0.740413529801 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1248603103 | -1.911 | 1.0 | D | 0.869 | 0.785 | 0.740413529801 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs1248603103 | -1.911 | 1.0 | D | 0.869 | 0.785 | 0.740413529801 | gnomAD-4.0.0 | 2.56253E-06 | None | None | None | None | N | None | 1.69113E-05 | 1.69474E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9945 | likely_pathogenic | 0.9921 | pathogenic | -3.361 | Highly Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Y/C | 0.9064 | likely_pathogenic | 0.8474 | pathogenic | -1.976 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.659947237 | None | None | N |
Y/D | 0.9945 | likely_pathogenic | 0.9938 | pathogenic | -3.658 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.660149042 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -3.434 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Y/F | 0.1735 | likely_benign | 0.1541 | benign | -1.241 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.512241552 | None | None | N |
Y/G | 0.9891 | likely_pathogenic | 0.9859 | pathogenic | -3.785 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/H | 0.9704 | likely_pathogenic | 0.9587 | pathogenic | -2.504 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.643493908 | None | None | N |
Y/I | 0.9603 | likely_pathogenic | 0.9502 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/K | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -2.228 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Y/L | 0.9337 | likely_pathogenic | 0.9199 | pathogenic | -1.93 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
Y/M | 0.9715 | likely_pathogenic | 0.9628 | pathogenic | -1.791 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/N | 0.969 | likely_pathogenic | 0.9579 | pathogenic | -3.024 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.660149042 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Y/Q | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -2.752 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/R | 0.9947 | likely_pathogenic | 0.9937 | pathogenic | -2.053 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Y/S | 0.9824 | likely_pathogenic | 0.9757 | pathogenic | -3.375 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.660149042 | None | None | N |
Y/T | 0.9927 | likely_pathogenic | 0.99 | pathogenic | -3.023 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/V | 0.942 | likely_pathogenic | 0.9268 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Y/W | 0.7826 | likely_pathogenic | 0.7794 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.