Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32449 | 97570;97571;97572 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
N2AB | 30808 | 92647;92648;92649 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
N2A | 29881 | 89866;89867;89868 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
N2B | 23384 | 70375;70376;70377 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
Novex-1 | 23509 | 70750;70751;70752 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
Novex-2 | 23576 | 70951;70952;70953 | chr2:178542411;178542410;178542409 | chr2:179407138;179407137;179407136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1248314451 | None | 0.122 | N | 0.275 | 0.257 | 0.243398259712 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/T | rs1248314451 | None | 0.122 | N | 0.275 | 0.257 | 0.243398259712 | gnomAD-4.0.0 | 9.91631E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35627E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1157 | likely_benign | 0.1118 | benign | -0.767 | Destabilizing | 0.835 | D | 0.425 | neutral | N | 0.431995968 | None | None | N |
P/C | 0.6614 | likely_pathogenic | 0.6361 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
P/D | 0.8328 | likely_pathogenic | 0.8519 | pathogenic | -0.684 | Destabilizing | 0.97 | D | 0.491 | neutral | None | None | None | None | N |
P/E | 0.6148 | likely_pathogenic | 0.6303 | pathogenic | -0.783 | Destabilizing | 0.97 | D | 0.485 | neutral | None | None | None | None | N |
P/F | 0.7628 | likely_pathogenic | 0.7628 | pathogenic | -0.821 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/G | 0.4809 | ambiguous | 0.4965 | ambiguous | -0.942 | Destabilizing | 0.97 | D | 0.532 | neutral | None | None | None | None | N |
P/H | 0.4363 | ambiguous | 0.4413 | ambiguous | -0.446 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.496410019 | None | None | N |
P/I | 0.4486 | ambiguous | 0.4271 | ambiguous | -0.441 | Destabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
P/K | 0.6581 | likely_pathogenic | 0.6618 | pathogenic | -0.758 | Destabilizing | 0.97 | D | 0.485 | neutral | None | None | None | None | N |
P/L | 0.1894 | likely_benign | 0.1858 | benign | -0.441 | Destabilizing | 0.961 | D | 0.568 | neutral | N | 0.419394817 | None | None | N |
P/M | 0.434 | ambiguous | 0.4204 | ambiguous | -0.421 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
P/N | 0.5713 | likely_pathogenic | 0.5863 | pathogenic | -0.471 | Destabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
P/Q | 0.3314 | likely_benign | 0.3306 | benign | -0.739 | Destabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | N |
P/R | 0.4797 | ambiguous | 0.467 | ambiguous | -0.152 | Destabilizing | 0.994 | D | 0.642 | neutral | N | 0.427339509 | None | None | N |
P/S | 0.2453 | likely_benign | 0.2517 | benign | -0.835 | Destabilizing | 0.489 | N | 0.319 | neutral | N | 0.445231837 | None | None | N |
P/T | 0.1702 | likely_benign | 0.1729 | benign | -0.837 | Destabilizing | 0.122 | N | 0.275 | neutral | N | 0.337853656 | None | None | N |
P/V | 0.2844 | likely_benign | 0.2732 | benign | -0.514 | Destabilizing | 0.97 | D | 0.549 | neutral | None | None | None | None | N |
P/W | 0.886 | likely_pathogenic | 0.8831 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
P/Y | 0.7405 | likely_pathogenic | 0.7323 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.