Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32451 | 97576;97577;97578 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
N2AB | 30810 | 92653;92654;92655 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
N2A | 29883 | 89872;89873;89874 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
N2B | 23386 | 70381;70382;70383 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
Novex-1 | 23511 | 70756;70757;70758 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
Novex-2 | 23578 | 70957;70958;70959 | chr2:178542405;178542404;178542403 | chr2:179407132;179407131;179407130 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.806 | 0.419 | 0.457377140028 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1636 | likely_benign | 0.1461 | benign | -0.638 | Destabilizing | 0.997 | D | 0.419 | neutral | N | 0.470863787 | None | None | N |
S/C | 0.1718 | likely_benign | 0.1445 | benign | -0.421 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.485539928 | None | None | N |
S/D | 0.9567 | likely_pathogenic | 0.9567 | pathogenic | 0.225 | Stabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
S/E | 0.9667 | likely_pathogenic | 0.9673 | pathogenic | 0.293 | Stabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
S/F | 0.812 | likely_pathogenic | 0.7832 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.822 | deleterious | N | 0.499249637 | None | None | N |
S/G | 0.3291 | likely_benign | 0.2748 | benign | -0.929 | Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
S/H | 0.875 | likely_pathogenic | 0.8693 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
S/I | 0.7299 | likely_pathogenic | 0.7193 | pathogenic | 0.041 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/K | 0.9891 | likely_pathogenic | 0.9897 | pathogenic | -0.14 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
S/L | 0.3679 | ambiguous | 0.3233 | benign | 0.041 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/M | 0.5139 | ambiguous | 0.472 | ambiguous | -0.016 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
S/N | 0.6513 | likely_pathogenic | 0.6029 | pathogenic | -0.38 | Destabilizing | 0.999 | D | 0.524 | neutral | None | None | None | None | N |
S/P | 0.9737 | likely_pathogenic | 0.9783 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.482386376 | None | None | N |
S/Q | 0.917 | likely_pathogenic | 0.9176 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
S/R | 0.9787 | likely_pathogenic | 0.9792 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
S/T | 0.2236 | likely_benign | 0.2056 | benign | -0.354 | Destabilizing | 0.999 | D | 0.462 | neutral | N | 0.502663987 | None | None | N |
S/V | 0.5926 | likely_pathogenic | 0.5858 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
S/W | 0.8524 | likely_pathogenic | 0.8423 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/Y | 0.7406 | likely_pathogenic | 0.7245 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.471790539 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.