Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32459 | 97600;97601;97602 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
N2AB | 30818 | 92677;92678;92679 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
N2A | 29891 | 89896;89897;89898 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
N2B | 23394 | 70405;70406;70407 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
Novex-1 | 23519 | 70780;70781;70782 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
Novex-2 | 23586 | 70981;70982;70983 | chr2:178542381;178542380;178542379 | chr2:179407108;179407107;179407106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | rs56009327 | None | 0.982 | N | 0.442 | 0.467 | 0.443285836454 | gnomAD-4.0.0 | 1.8475E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.42869E-05 | 0 | 0 |
F/V | None | None | 0.939 | N | 0.482 | 0.386 | 0.550885202691 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99514E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9358 | likely_pathogenic | 0.9047 | pathogenic | -1.628 | Destabilizing | 0.953 | D | 0.519 | neutral | None | None | None | None | N |
F/C | 0.5206 | ambiguous | 0.4411 | ambiguous | -1.008 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.494239292 | None | None | N |
F/D | 0.9949 | likely_pathogenic | 0.9927 | pathogenic | -1.936 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
F/E | 0.9908 | likely_pathogenic | 0.988 | pathogenic | -1.712 | Destabilizing | 0.993 | D | 0.686 | prob.neutral | None | None | None | None | N |
F/G | 0.9777 | likely_pathogenic | 0.9621 | pathogenic | -2.06 | Highly Destabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | N |
F/H | 0.8836 | likely_pathogenic | 0.8683 | pathogenic | -0.908 | Destabilizing | 0.986 | D | 0.597 | neutral | None | None | None | None | N |
F/I | 0.6227 | likely_pathogenic | 0.6083 | pathogenic | -0.253 | Destabilizing | 0.982 | D | 0.442 | neutral | N | 0.461222797 | None | None | N |
F/K | 0.9868 | likely_pathogenic | 0.9831 | pathogenic | -1.409 | Destabilizing | 0.993 | D | 0.691 | prob.neutral | None | None | None | None | N |
F/L | 0.9609 | likely_pathogenic | 0.948 | pathogenic | -0.253 | Destabilizing | 0.885 | D | 0.508 | neutral | N | 0.438017863 | None | None | N |
F/M | 0.7794 | likely_pathogenic | 0.7479 | pathogenic | -0.144 | Destabilizing | 0.999 | D | 0.476 | neutral | None | None | None | None | N |
F/N | 0.9693 | likely_pathogenic | 0.9622 | pathogenic | -2.003 | Highly Destabilizing | 0.993 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/P | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -0.717 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/Q | 0.9672 | likely_pathogenic | 0.9587 | pathogenic | -1.766 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
F/R | 0.9691 | likely_pathogenic | 0.9581 | pathogenic | -1.349 | Destabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/S | 0.9264 | likely_pathogenic | 0.8955 | pathogenic | -2.565 | Highly Destabilizing | 0.991 | D | 0.604 | neutral | N | 0.490842619 | None | None | N |
F/T | 0.9426 | likely_pathogenic | 0.9274 | pathogenic | -2.221 | Highly Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | N |
F/V | 0.5826 | likely_pathogenic | 0.5407 | ambiguous | -0.717 | Destabilizing | 0.939 | D | 0.482 | neutral | N | 0.477610827 | None | None | N |
F/W | 0.7107 | likely_pathogenic | 0.671 | pathogenic | 0.395 | Stabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | N |
F/Y | 0.2076 | likely_benign | 0.1933 | benign | 0.122 | Stabilizing | 0.02 | N | 0.227 | neutral | N | 0.439612586 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.