Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3246 | 9961;9962;9963 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
N2AB | 3246 | 9961;9962;9963 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
N2A | 3246 | 9961;9962;9963 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
N2B | 3200 | 9823;9824;9825 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
Novex-1 | 3200 | 9823;9824;9825 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
Novex-2 | 3200 | 9823;9824;9825 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
Novex-3 | 3246 | 9961;9962;9963 | chr2:178764779;178764778;178764777 | chr2:179629506;179629505;179629504 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.966 | D | 0.353 | 0.264 | 0.331876078066 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/L | None | None | 0.801 | N | 0.381 | 0.495 | 0.652016397996 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/R | None | None | 0.801 | N | 0.346 | 0.249 | 0.208816687407 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.23 | likely_benign | 0.3028 | benign | -0.281 | Destabilizing | 0.688 | D | 0.339 | neutral | None | None | None | None | I |
Q/C | 0.6277 | likely_pathogenic | 0.8021 | pathogenic | -0.006 | Destabilizing | 0.998 | D | 0.394 | neutral | None | None | None | None | I |
Q/D | 0.396 | ambiguous | 0.5853 | pathogenic | 0.028 | Stabilizing | 0.525 | D | 0.347 | neutral | None | None | None | None | I |
Q/E | 0.0861 | likely_benign | 0.1021 | benign | 0.045 | Stabilizing | 0.002 | N | 0.099 | neutral | N | 0.459304165 | None | None | I |
Q/F | 0.662 | likely_pathogenic | 0.7999 | pathogenic | -0.339 | Destabilizing | 0.991 | D | 0.378 | neutral | None | None | None | None | I |
Q/G | 0.297 | likely_benign | 0.4333 | ambiguous | -0.512 | Destabilizing | 0.915 | D | 0.386 | neutral | None | None | None | None | I |
Q/H | 0.205 | likely_benign | 0.3296 | benign | -0.204 | Destabilizing | 0.966 | D | 0.353 | neutral | D | 0.543123534 | None | None | I |
Q/I | 0.3697 | ambiguous | 0.4804 | ambiguous | 0.254 | Stabilizing | 0.974 | D | 0.382 | neutral | None | None | None | None | I |
Q/K | 0.0955 | likely_benign | 0.1263 | benign | -0.037 | Destabilizing | 0.454 | N | 0.377 | neutral | N | 0.495319605 | None | None | I |
Q/L | 0.1252 | likely_benign | 0.1694 | benign | 0.254 | Stabilizing | 0.801 | D | 0.381 | neutral | N | 0.506786063 | None | None | I |
Q/M | 0.3751 | ambiguous | 0.454 | ambiguous | 0.255 | Stabilizing | 0.991 | D | 0.354 | neutral | None | None | None | None | I |
Q/N | 0.3059 | likely_benign | 0.4295 | ambiguous | -0.464 | Destabilizing | 0.842 | D | 0.309 | neutral | None | None | None | None | I |
Q/P | 0.181 | likely_benign | 0.3168 | benign | 0.105 | Stabilizing | 0.891 | D | 0.373 | neutral | D | 0.543123534 | None | None | I |
Q/R | 0.1139 | likely_benign | 0.1543 | benign | 0.148 | Stabilizing | 0.801 | D | 0.346 | neutral | N | 0.498705242 | None | None | I |
Q/S | 0.2498 | likely_benign | 0.3418 | ambiguous | -0.472 | Destabilizing | 0.688 | D | 0.341 | neutral | None | None | None | None | I |
Q/T | 0.2229 | likely_benign | 0.2948 | benign | -0.288 | Destabilizing | 0.842 | D | 0.331 | neutral | None | None | None | None | I |
Q/V | 0.2613 | likely_benign | 0.3355 | benign | 0.105 | Stabilizing | 0.915 | D | 0.396 | neutral | None | None | None | None | I |
Q/W | 0.5449 | ambiguous | 0.7602 | pathogenic | -0.318 | Destabilizing | 0.998 | D | 0.407 | neutral | None | None | None | None | I |
Q/Y | 0.4533 | ambiguous | 0.6327 | pathogenic | -0.063 | Destabilizing | 0.991 | D | 0.356 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.