Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32467 | 97624;97625;97626 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
N2AB | 30826 | 92701;92702;92703 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
N2A | 29899 | 89920;89921;89922 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
N2B | 23402 | 70429;70430;70431 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
Novex-1 | 23527 | 70804;70805;70806 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
Novex-2 | 23594 | 71005;71006;71007 | chr2:178542357;178542356;178542355 | chr2:179407084;179407083;179407082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs2154142486 | None | 1.0 | N | 0.855 | 0.572 | 0.665958451526 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
G/R | rs2154142487 | None | 1.0 | D | 0.842 | 0.567 | 0.765156682138 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4479 | ambiguous | 0.3072 | benign | -0.533 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.511107057 | None | None | N |
G/C | 0.5377 | ambiguous | 0.3705 | ambiguous | -0.826 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/D | 0.2964 | likely_benign | 0.24 | benign | -1.18 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/E | 0.4135 | ambiguous | 0.3189 | benign | -1.345 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.513740403 | None | None | N |
G/F | 0.8628 | likely_pathogenic | 0.7425 | pathogenic | -1.241 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
G/H | 0.635 | likely_pathogenic | 0.5069 | ambiguous | -0.82 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
G/I | 0.8832 | likely_pathogenic | 0.7662 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/K | 0.6358 | likely_pathogenic | 0.5505 | ambiguous | -1.083 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/L | 0.8274 | likely_pathogenic | 0.6869 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/M | 0.8149 | likely_pathogenic | 0.6705 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
G/N | 0.3105 | likely_benign | 0.2393 | benign | -0.651 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/P | 0.9891 | likely_pathogenic | 0.977 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/Q | 0.5452 | ambiguous | 0.4481 | ambiguous | -1.02 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/R | 0.5798 | likely_pathogenic | 0.5081 | ambiguous | -0.521 | Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.537213482 | None | None | N |
G/S | 0.2424 | likely_benign | 0.1643 | benign | -0.755 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
G/T | 0.5171 | ambiguous | 0.3657 | ambiguous | -0.868 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/V | 0.7978 | likely_pathogenic | 0.6477 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.5447219 | None | None | N |
G/W | 0.7304 | likely_pathogenic | 0.5568 | ambiguous | -1.391 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/Y | 0.7134 | likely_pathogenic | 0.5404 | ambiguous | -1.064 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.