Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32468 | 97627;97628;97629 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
N2AB | 30827 | 92704;92705;92706 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
N2A | 29900 | 89923;89924;89925 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
N2B | 23403 | 70432;70433;70434 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
Novex-1 | 23528 | 70807;70808;70809 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
Novex-2 | 23595 | 71008;71009;71010 | chr2:178542354;178542353;178542352 | chr2:179407081;179407080;179407079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.801 | N | 0.271 | 0.149 | 0.0551355673512 | gnomAD-4.0.0 | 2.40134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62576E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1469 | likely_benign | 0.1058 | benign | -0.848 | Destabilizing | 0.007 | N | 0.226 | neutral | None | None | None | None | N |
N/C | 0.1477 | likely_benign | 0.116 | benign | 0.119 | Stabilizing | 0.998 | D | 0.431 | neutral | None | None | None | None | N |
N/D | 0.171 | likely_benign | 0.1556 | benign | -0.797 | Destabilizing | 0.801 | D | 0.294 | neutral | N | 0.451005803 | None | None | N |
N/E | 0.3177 | likely_benign | 0.2858 | benign | -0.714 | Destabilizing | 0.842 | D | 0.267 | neutral | None | None | None | None | N |
N/F | 0.4341 | ambiguous | 0.3342 | benign | -0.626 | Destabilizing | 0.974 | D | 0.448 | neutral | None | None | None | None | N |
N/G | 0.2162 | likely_benign | 0.1598 | benign | -1.185 | Destabilizing | 0.525 | D | 0.253 | neutral | None | None | None | None | N |
N/H | 0.1028 | likely_benign | 0.0919 | benign | -0.997 | Destabilizing | 0.989 | D | 0.361 | neutral | N | 0.419221458 | None | None | N |
N/I | 0.1825 | likely_benign | 0.1413 | benign | 0.007 | Stabilizing | 0.934 | D | 0.457 | neutral | N | 0.437268502 | None | None | N |
N/K | 0.2695 | likely_benign | 0.2374 | benign | -0.366 | Destabilizing | 0.801 | D | 0.271 | neutral | N | 0.40642552 | None | None | N |
N/L | 0.2052 | likely_benign | 0.149 | benign | 0.007 | Stabilizing | 0.728 | D | 0.331 | neutral | None | None | None | None | N |
N/M | 0.2112 | likely_benign | 0.1631 | benign | 0.603 | Stabilizing | 0.998 | D | 0.395 | neutral | None | None | None | None | N |
N/P | 0.9059 | likely_pathogenic | 0.8437 | pathogenic | -0.249 | Destabilizing | 0.974 | D | 0.416 | neutral | None | None | None | None | N |
N/Q | 0.2317 | likely_benign | 0.2049 | benign | -0.957 | Destabilizing | 0.974 | D | 0.363 | neutral | None | None | None | None | N |
N/R | 0.2789 | likely_benign | 0.2443 | benign | -0.361 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | N |
N/S | 0.0661 | likely_benign | 0.0575 | benign | -0.903 | Destabilizing | 0.454 | N | 0.352 | neutral | N | 0.356978134 | None | None | N |
N/T | 0.0869 | likely_benign | 0.0709 | benign | -0.638 | Destabilizing | 0.007 | N | 0.065 | neutral | N | 0.321897194 | None | None | N |
N/V | 0.1657 | likely_benign | 0.1264 | benign | -0.249 | Destabilizing | 0.728 | D | 0.334 | neutral | None | None | None | None | N |
N/W | 0.6884 | likely_pathogenic | 0.5958 | pathogenic | -0.421 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | N |
N/Y | 0.1584 | likely_benign | 0.1318 | benign | -0.223 | Destabilizing | 0.989 | D | 0.409 | neutral | N | 0.499567754 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.