Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32474 | 97645;97646;97647 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
N2AB | 30833 | 92722;92723;92724 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
N2A | 29906 | 89941;89942;89943 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
N2B | 23409 | 70450;70451;70452 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
Novex-1 | 23534 | 70825;70826;70827 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
Novex-2 | 23601 | 71026;71027;71028 | chr2:178542336;178542335;178542334 | chr2:179407063;179407062;179407061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs763649965 | -1.457 | 0.942 | D | 0.626 | 0.678 | 0.710806825143 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/M | rs763649965 | -1.457 | 0.942 | D | 0.626 | 0.678 | 0.710806825143 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6536 | likely_pathogenic | 0.5361 | ambiguous | -2.551 | Highly Destabilizing | 0.058 | N | 0.321 | neutral | D | 0.535856443 | None | None | N |
V/C | 0.9495 | likely_pathogenic | 0.9274 | pathogenic | -1.721 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
V/D | 0.9987 | likely_pathogenic | 0.9982 | pathogenic | -3.227 | Highly Destabilizing | 0.993 | D | 0.878 | deleterious | None | None | None | None | N |
V/E | 0.9957 | likely_pathogenic | 0.9941 | pathogenic | -2.933 | Highly Destabilizing | 0.971 | D | 0.841 | deleterious | D | 0.645967356 | None | None | N |
V/F | 0.9511 | likely_pathogenic | 0.9108 | pathogenic | -1.44 | Destabilizing | 0.956 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/G | 0.9189 | likely_pathogenic | 0.8768 | pathogenic | -3.074 | Highly Destabilizing | 0.942 | D | 0.851 | deleterious | D | 0.645967356 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -2.765 | Highly Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.1234 | likely_benign | 0.1098 | benign | -0.992 | Destabilizing | 0.019 | N | 0.226 | neutral | None | None | None | None | N |
V/K | 0.9977 | likely_pathogenic | 0.997 | pathogenic | -2.003 | Highly Destabilizing | 0.978 | D | 0.845 | deleterious | None | None | None | None | N |
V/L | 0.8082 | likely_pathogenic | 0.7328 | pathogenic | -0.992 | Destabilizing | 0.247 | N | 0.602 | neutral | D | 0.552373628 | None | None | N |
V/M | 0.8317 | likely_pathogenic | 0.7178 | pathogenic | -1.294 | Destabilizing | 0.942 | D | 0.626 | neutral | D | 0.550099585 | None | None | N |
V/N | 0.9948 | likely_pathogenic | 0.9926 | pathogenic | -2.699 | Highly Destabilizing | 0.993 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9934 | likely_pathogenic | 0.9948 | pathogenic | -1.502 | Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | N |
V/Q | 0.996 | likely_pathogenic | 0.9941 | pathogenic | -2.35 | Highly Destabilizing | 0.993 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.9947 | likely_pathogenic | 0.9929 | pathogenic | -2.115 | Highly Destabilizing | 0.978 | D | 0.903 | deleterious | None | None | None | None | N |
V/S | 0.9464 | likely_pathogenic | 0.9113 | pathogenic | -3.079 | Highly Destabilizing | 0.915 | D | 0.838 | deleterious | None | None | None | None | N |
V/T | 0.8072 | likely_pathogenic | 0.705 | pathogenic | -2.648 | Highly Destabilizing | 0.86 | D | 0.603 | neutral | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9988 | pathogenic | -1.773 | Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9959 | likely_pathogenic | 0.9928 | pathogenic | -1.66 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.