Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32484 | 97675;97676;97677 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
N2AB | 30843 | 92752;92753;92754 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
N2A | 29916 | 89971;89972;89973 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
N2B | 23419 | 70480;70481;70482 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
Novex-1 | 23544 | 70855;70856;70857 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
Novex-2 | 23611 | 71056;71057;71058 | chr2:178542306;178542305;178542304 | chr2:179407033;179407032;179407031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.697 | 0.358 | 0.294561560033 | gnomAD-4.0.0 | 1.3699E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32807E-05 | 0 |
S/F | rs1462608160 | None | 0.994 | N | 0.705 | 0.317 | 0.442977140156 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/F | rs1462608160 | None | 0.994 | N | 0.705 | 0.317 | 0.442977140156 | gnomAD-4.0.0 | 1.24063E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69617E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0909 | likely_benign | 0.0785 | benign | -0.773 | Destabilizing | 0.835 | D | 0.481 | neutral | N | 0.396061305 | None | None | I |
S/C | 0.1393 | likely_benign | 0.1187 | benign | -0.492 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.502210122 | None | None | I |
S/D | 0.3394 | likely_benign | 0.2904 | benign | 0.036 | Stabilizing | 0.985 | D | 0.556 | neutral | None | None | None | None | I |
S/E | 0.4495 | ambiguous | 0.402 | ambiguous | 0.01 | Stabilizing | 0.97 | D | 0.553 | neutral | None | None | None | None | I |
S/F | 0.2988 | likely_benign | 0.2262 | benign | -0.967 | Destabilizing | 0.994 | D | 0.705 | prob.neutral | N | 0.483104287 | None | None | I |
S/G | 0.0818 | likely_benign | 0.0736 | benign | -0.995 | Destabilizing | 0.041 | N | 0.187 | neutral | None | None | None | None | I |
S/H | 0.366 | ambiguous | 0.3047 | benign | -1.373 | Destabilizing | 0.191 | N | 0.337 | neutral | None | None | None | None | I |
S/I | 0.2223 | likely_benign | 0.1742 | benign | -0.293 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
S/K | 0.6574 | likely_pathogenic | 0.5744 | pathogenic | -0.679 | Destabilizing | 0.985 | D | 0.568 | neutral | None | None | None | None | I |
S/L | 0.1327 | likely_benign | 0.1043 | benign | -0.293 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | I |
S/M | 0.2373 | likely_benign | 0.1977 | benign | -0.044 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
S/N | 0.1138 | likely_benign | 0.0965 | benign | -0.52 | Destabilizing | 0.97 | D | 0.555 | neutral | None | None | None | None | I |
S/P | 0.1108 | likely_benign | 0.0979 | benign | -0.421 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.352134383 | None | None | I |
S/Q | 0.4543 | ambiguous | 0.3998 | ambiguous | -0.708 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | I |
S/R | 0.6133 | likely_pathogenic | 0.5173 | ambiguous | -0.507 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | I |
S/T | 0.0927 | likely_benign | 0.0819 | benign | -0.62 | Destabilizing | 0.98 | D | 0.551 | neutral | N | 0.417226011 | None | None | I |
S/V | 0.2086 | likely_benign | 0.1697 | benign | -0.421 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
S/W | 0.4635 | ambiguous | 0.3642 | ambiguous | -0.891 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
S/Y | 0.2642 | likely_benign | 0.204 | benign | -0.659 | Destabilizing | 0.989 | D | 0.708 | prob.delet. | N | 0.501690047 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.