Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32485 | 97678;97679;97680 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
N2AB | 30844 | 92755;92756;92757 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
N2A | 29917 | 89974;89975;89976 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
N2B | 23420 | 70483;70484;70485 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
Novex-1 | 23545 | 70858;70859;70860 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
Novex-2 | 23612 | 71059;71060;71061 | chr2:178542303;178542302;178542301 | chr2:179407030;179407029;179407028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.998 | N | 0.673 | 0.324 | 0.324161360171 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7464 | likely_pathogenic | 0.6284 | pathogenic | -2.469 | Highly Destabilizing | 0.985 | D | 0.588 | neutral | None | None | None | None | I |
Y/C | 0.3106 | likely_benign | 0.2179 | benign | -1.094 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.472199753 | None | None | I |
Y/D | 0.8293 | likely_pathogenic | 0.769 | pathogenic | -2.285 | Highly Destabilizing | 0.998 | D | 0.705 | prob.neutral | N | 0.471946264 | None | None | I |
Y/E | 0.9492 | likely_pathogenic | 0.9262 | pathogenic | -2.103 | Highly Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
Y/F | 0.0948 | likely_benign | 0.0875 | benign | -0.747 | Destabilizing | 0.031 | N | 0.194 | neutral | N | 0.429251159 | None | None | I |
Y/G | 0.7006 | likely_pathogenic | 0.5897 | pathogenic | -2.86 | Highly Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | I |
Y/H | 0.466 | ambiguous | 0.3715 | ambiguous | -1.362 | Destabilizing | 0.998 | D | 0.673 | neutral | N | 0.460589958 | None | None | I |
Y/I | 0.8358 | likely_pathogenic | 0.7807 | pathogenic | -1.204 | Destabilizing | 0.97 | D | 0.63 | neutral | None | None | None | None | I |
Y/K | 0.9568 | likely_pathogenic | 0.94 | pathogenic | -1.424 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
Y/L | 0.7952 | likely_pathogenic | 0.7392 | pathogenic | -1.204 | Destabilizing | 0.871 | D | 0.627 | neutral | None | None | None | None | I |
Y/M | 0.867 | likely_pathogenic | 0.8249 | pathogenic | -0.898 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
Y/N | 0.6011 | likely_pathogenic | 0.5058 | ambiguous | -2.067 | Highly Destabilizing | 0.998 | D | 0.715 | prob.delet. | N | 0.460589958 | None | None | I |
Y/P | 0.6505 | likely_pathogenic | 0.5385 | ambiguous | -1.634 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
Y/Q | 0.9124 | likely_pathogenic | 0.8548 | pathogenic | -1.875 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
Y/R | 0.9105 | likely_pathogenic | 0.867 | pathogenic | -1.199 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
Y/S | 0.489 | ambiguous | 0.3727 | ambiguous | -2.506 | Highly Destabilizing | 0.998 | D | 0.615 | neutral | N | 0.470678816 | None | None | I |
Y/T | 0.8085 | likely_pathogenic | 0.7365 | pathogenic | -2.212 | Highly Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | I |
Y/V | 0.7155 | likely_pathogenic | 0.6424 | pathogenic | -1.634 | Destabilizing | 0.97 | D | 0.615 | neutral | None | None | None | None | I |
Y/W | 0.5101 | ambiguous | 0.4449 | ambiguous | -0.12 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.