Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32489 | 97690;97691;97692 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
N2AB | 30848 | 92767;92768;92769 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
N2A | 29921 | 89986;89987;89988 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
N2B | 23424 | 70495;70496;70497 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
Novex-1 | 23549 | 70870;70871;70872 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
Novex-2 | 23616 | 71071;71072;71073 | chr2:178542291;178542290;178542289 | chr2:179407018;179407017;179407016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs987967114 | -1.253 | 0.988 | N | 0.609 | 0.268 | 0.311079019809 | gnomAD-2.1.1 | 8.2E-06 | None | None | None | None | N | None | 0 | 5.87E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs987967114 | -1.253 | 0.988 | N | 0.609 | 0.268 | 0.311079019809 | gnomAD-4.0.0 | 3.19546E-06 | None | None | None | None | N | None | 0 | 4.60172E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.787 | N | 0.439 | 0.246 | 0.128392430309 | gnomAD-4.0.0 | 4.79278E-06 | None | None | None | None | N | None | 0 | 6.90131E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1514 | likely_benign | 0.1327 | benign | -0.141 | Destabilizing | 0.976 | D | 0.569 | neutral | N | 0.507445371 | None | None | N |
E/C | 0.8228 | likely_pathogenic | 0.7508 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | N |
E/D | 0.0699 | likely_benign | 0.0692 | benign | -0.453 | Destabilizing | 0.976 | D | 0.607 | neutral | N | 0.452976168 | None | None | N |
E/F | 0.8377 | likely_pathogenic | 0.7602 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
E/G | 0.154 | likely_benign | 0.144 | benign | -0.351 | Destabilizing | 0.988 | D | 0.609 | neutral | N | 0.513160622 | None | None | N |
E/H | 0.4301 | ambiguous | 0.3753 | ambiguous | 0.711 | Stabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
E/I | 0.5035 | ambiguous | 0.4129 | ambiguous | 0.384 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/K | 0.1455 | likely_benign | 0.1293 | benign | 0.456 | Stabilizing | 0.954 | D | 0.587 | neutral | N | 0.495940298 | None | None | N |
E/L | 0.5024 | ambiguous | 0.4193 | ambiguous | 0.384 | Stabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | N |
E/M | 0.5591 | ambiguous | 0.4628 | ambiguous | 0.165 | Stabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | N |
E/N | 0.1663 | likely_benign | 0.1442 | benign | -0.213 | Destabilizing | 0.997 | D | 0.493 | neutral | None | None | None | None | N |
E/P | 0.2699 | likely_benign | 0.2653 | benign | 0.229 | Stabilizing | 0.145 | N | 0.499 | neutral | None | None | None | None | N |
E/Q | 0.1655 | likely_benign | 0.1465 | benign | -0.117 | Destabilizing | 0.787 | D | 0.439 | neutral | N | 0.514872775 | None | None | N |
E/R | 0.2612 | likely_benign | 0.2214 | benign | 0.803 | Stabilizing | 0.995 | D | 0.508 | neutral | None | None | None | None | N |
E/S | 0.1585 | likely_benign | 0.1383 | benign | -0.289 | Destabilizing | 0.982 | D | 0.555 | neutral | None | None | None | None | N |
E/T | 0.2235 | likely_benign | 0.1859 | benign | -0.094 | Destabilizing | 0.997 | D | 0.533 | neutral | None | None | None | None | N |
E/V | 0.2963 | likely_benign | 0.2423 | benign | 0.229 | Stabilizing | 0.997 | D | 0.591 | neutral | N | 0.46489928 | None | None | N |
E/W | 0.9175 | likely_pathogenic | 0.8671 | pathogenic | 0.379 | Stabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
E/Y | 0.6814 | likely_pathogenic | 0.5848 | pathogenic | 0.462 | Stabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.