Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32493 | 97702;97703;97704 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
N2AB | 30852 | 92779;92780;92781 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
N2A | 29925 | 89998;89999;90000 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
N2B | 23428 | 70507;70508;70509 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
Novex-1 | 23553 | 70882;70883;70884 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
Novex-2 | 23620 | 71083;71084;71085 | chr2:178542279;178542278;178542277 | chr2:179407006;179407005;179407004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.999 | N | 0.813 | 0.507 | 0.86908709854 | gnomAD-4.0.0 | 1.60681E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04599E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6281 | likely_pathogenic | 0.5647 | pathogenic | -1.443 | Destabilizing | 0.995 | D | 0.597 | neutral | None | None | None | None | N |
C/D | 0.9966 | likely_pathogenic | 0.9946 | pathogenic | -1.837 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
C/E | 0.9975 | likely_pathogenic | 0.9959 | pathogenic | -1.637 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
C/F | 0.8932 | likely_pathogenic | 0.8165 | pathogenic | -1.208 | Destabilizing | 0.999 | D | 0.885 | deleterious | N | 0.48421739 | None | None | N |
C/G | 0.684 | likely_pathogenic | 0.5701 | pathogenic | -1.687 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.48447088 | None | None | N |
C/H | 0.9913 | likely_pathogenic | 0.9853 | pathogenic | -2.05 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
C/I | 0.7677 | likely_pathogenic | 0.6923 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
C/K | 0.9978 | likely_pathogenic | 0.9962 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
C/L | 0.7749 | likely_pathogenic | 0.7386 | pathogenic | -0.804 | Destabilizing | 0.998 | D | 0.649 | prob.neutral | None | None | None | None | N |
C/M | 0.9051 | likely_pathogenic | 0.8884 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
C/N | 0.9709 | likely_pathogenic | 0.957 | pathogenic | -1.53 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
C/P | 0.9742 | likely_pathogenic | 0.9625 | pathogenic | -0.999 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
C/Q | 0.9914 | likely_pathogenic | 0.9869 | pathogenic | -1.15 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
C/R | 0.9856 | likely_pathogenic | 0.9753 | pathogenic | -1.5 | Destabilizing | 0.999 | D | 0.884 | deleterious | N | 0.485484838 | None | None | N |
C/S | 0.8032 | likely_pathogenic | 0.734 | pathogenic | -1.705 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.483963901 | None | None | N |
C/T | 0.8671 | likely_pathogenic | 0.8234 | pathogenic | -1.373 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
C/V | 0.616 | likely_pathogenic | 0.5569 | ambiguous | -0.999 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
C/W | 0.9873 | likely_pathogenic | 0.9743 | pathogenic | -1.72 | Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.485738328 | None | None | N |
C/Y | 0.9546 | likely_pathogenic | 0.915 | pathogenic | -1.388 | Destabilizing | 0.999 | D | 0.896 | deleterious | N | 0.484977859 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.