Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32495 | 97708;97709;97710 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
N2AB | 30854 | 92785;92786;92787 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
N2A | 29927 | 90004;90005;90006 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
N2B | 23430 | 70513;70514;70515 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
Novex-1 | 23555 | 70888;70889;70890 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
Novex-2 | 23622 | 71089;71090;71091 | chr2:178542273;178542272;178542271 | chr2:179407000;179406999;179406998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1328086725 | -0.875 | 0.997 | N | 0.53 | 0.227 | 0.395894371353 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.17E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2008 | likely_benign | 0.1708 | benign | -0.206 | Destabilizing | 0.995 | D | 0.513 | neutral | None | None | None | None | N |
S/C | 0.3594 | ambiguous | 0.2833 | benign | -0.203 | Destabilizing | 1.0 | D | 0.725 | deleterious | N | 0.521858329 | None | None | N |
S/D | 0.6471 | likely_pathogenic | 0.5681 | pathogenic | -0.031 | Destabilizing | 0.998 | D | 0.727 | deleterious | None | None | None | None | N |
S/E | 0.8647 | likely_pathogenic | 0.8105 | pathogenic | -0.145 | Destabilizing | 0.998 | D | 0.739 | deleterious | None | None | None | None | N |
S/F | 0.7175 | likely_pathogenic | 0.6181 | pathogenic | -0.928 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
S/G | 0.1888 | likely_benign | 0.1392 | benign | -0.262 | Destabilizing | 0.997 | D | 0.53 | neutral | N | 0.490841988 | None | None | N |
S/H | 0.7122 | likely_pathogenic | 0.6121 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/I | 0.7229 | likely_pathogenic | 0.6199 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.521511612 | None | None | N |
S/K | 0.9535 | likely_pathogenic | 0.9182 | pathogenic | -0.355 | Destabilizing | 0.998 | D | 0.721 | deleterious | None | None | None | None | N |
S/L | 0.3959 | ambiguous | 0.308 | benign | -0.192 | Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
S/M | 0.6325 | likely_pathogenic | 0.5427 | ambiguous | 0.028 | Stabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
S/N | 0.3313 | likely_benign | 0.2441 | benign | -0.054 | Destabilizing | 0.997 | D | 0.73 | deleterious | N | 0.429236169 | None | None | N |
S/P | 0.4119 | ambiguous | 0.313 | benign | -0.172 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | N |
S/Q | 0.8604 | likely_pathogenic | 0.7924 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
S/R | 0.9392 | likely_pathogenic | 0.8943 | pathogenic | -0.086 | Destabilizing | 0.999 | D | 0.727 | deleterious | N | 0.502232418 | None | None | N |
S/T | 0.1826 | likely_benign | 0.1459 | benign | -0.173 | Destabilizing | 0.997 | D | 0.579 | neutral | N | 0.436292641 | None | None | N |
S/V | 0.6502 | likely_pathogenic | 0.551 | ambiguous | -0.172 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
S/W | 0.7438 | likely_pathogenic | 0.681 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
S/Y | 0.5477 | ambiguous | 0.4597 | ambiguous | -0.676 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.