Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32499 | 97720;97721;97722 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
N2AB | 30858 | 92797;92798;92799 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
N2A | 29931 | 90016;90017;90018 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
N2B | 23434 | 70525;70526;70527 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
Novex-1 | 23559 | 70900;70901;70902 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
Novex-2 | 23626 | 71101;71102;71103 | chr2:178541582;178541581;178541580 | chr2:179406309;179406308;179406307 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.115 | N | 0.525 | 0.301 | 0.592571446383 | gnomAD-4.0.0 | 1.37649E-06 | None | None | None | None | I | None | 0 | 2.27097E-05 | None | 0 | 0 | None | 0 | 0 | 9.03664E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3943 | ambiguous | 0.2593 | benign | -0.424 | Destabilizing | 0.034 | N | 0.456 | neutral | None | None | None | None | I |
I/C | 0.6777 | likely_pathogenic | 0.5316 | ambiguous | -0.758 | Destabilizing | 0.934 | D | 0.425 | neutral | None | None | None | None | I |
I/D | 0.7222 | likely_pathogenic | 0.6067 | pathogenic | -0.017 | Destabilizing | 0.552 | D | 0.657 | prob.neutral | None | None | None | None | I |
I/E | 0.5287 | ambiguous | 0.4134 | ambiguous | -0.111 | Destabilizing | 0.552 | D | 0.597 | neutral | None | None | None | None | I |
I/F | 0.2621 | likely_benign | 0.1902 | benign | -0.523 | Destabilizing | 0.314 | N | 0.344 | neutral | N | 0.500365549 | None | None | I |
I/G | 0.6976 | likely_pathogenic | 0.5378 | ambiguous | -0.543 | Destabilizing | 0.378 | N | 0.579 | neutral | None | None | None | None | I |
I/H | 0.5999 | likely_pathogenic | 0.4437 | ambiguous | 0.104 | Stabilizing | 0.934 | D | 0.646 | neutral | None | None | None | None | I |
I/K | 0.3917 | ambiguous | 0.2888 | benign | -0.232 | Destabilizing | 0.378 | N | 0.587 | neutral | None | None | None | None | I |
I/L | 0.1179 | likely_benign | 0.0847 | benign | -0.238 | Destabilizing | None | N | 0.119 | neutral | N | 0.454051682 | None | None | I |
I/M | 0.1328 | likely_benign | 0.0967 | benign | -0.474 | Destabilizing | 0.004 | N | 0.397 | neutral | N | 0.480142467 | None | None | I |
I/N | 0.2953 | likely_benign | 0.2201 | benign | -0.103 | Destabilizing | 0.481 | N | 0.661 | prob.neutral | N | 0.480649446 | None | None | I |
I/P | 0.3838 | ambiguous | 0.2685 | benign | -0.27 | Destabilizing | 0.789 | D | 0.654 | prob.neutral | None | None | None | None | I |
I/Q | 0.4357 | ambiguous | 0.3112 | benign | -0.29 | Destabilizing | 0.378 | N | 0.654 | prob.neutral | None | None | None | None | I |
I/R | 0.3606 | ambiguous | 0.2652 | benign | 0.235 | Stabilizing | 0.378 | N | 0.653 | prob.neutral | None | None | None | None | I |
I/S | 0.3291 | likely_benign | 0.2471 | benign | -0.531 | Destabilizing | 0.314 | N | 0.47 | neutral | N | 0.484934736 | None | None | I |
I/T | 0.2666 | likely_benign | 0.185 | benign | -0.517 | Destabilizing | 0.115 | N | 0.525 | neutral | N | 0.420403255 | None | None | I |
I/V | 0.0861 | likely_benign | 0.0698 | benign | -0.27 | Destabilizing | 0.002 | N | 0.176 | neutral | N | 0.401217275 | None | None | I |
I/W | 0.8499 | likely_pathogenic | 0.7584 | pathogenic | -0.537 | Destabilizing | 0.934 | D | 0.709 | prob.delet. | None | None | None | None | I |
I/Y | 0.5548 | ambiguous | 0.4648 | ambiguous | -0.286 | Destabilizing | 0.552 | D | 0.489 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.