Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32502 | 97729;97730;97731 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
N2AB | 30861 | 92806;92807;92808 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
N2A | 29934 | 90025;90026;90027 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
N2B | 23437 | 70534;70535;70536 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
Novex-1 | 23562 | 70909;70910;70911 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
Novex-2 | 23629 | 71110;71111;71112 | chr2:178541573;178541572;178541571 | chr2:179406300;179406299;179406298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.026 | N | 0.604 | 0.358 | 0.543691374674 | gnomAD-4.0.0 | 1.37501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80591E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0719 | likely_benign | 0.0629 | benign | -1.355 | Destabilizing | 0.103 | N | 0.481 | neutral | N | 0.466124397 | None | None | N |
P/C | 0.432 | ambiguous | 0.3651 | ambiguous | -0.876 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
P/D | 0.7478 | likely_pathogenic | 0.7284 | pathogenic | -1.55 | Destabilizing | 0.976 | D | 0.755 | deleterious | None | None | None | None | N |
P/E | 0.3847 | ambiguous | 0.3434 | ambiguous | -1.609 | Destabilizing | 0.976 | D | 0.756 | deleterious | None | None | None | None | N |
P/F | 0.5006 | ambiguous | 0.4289 | ambiguous | -1.281 | Destabilizing | 0.976 | D | 0.837 | deleterious | None | None | None | None | N |
P/G | 0.438 | ambiguous | 0.3987 | ambiguous | -1.607 | Destabilizing | 0.851 | D | 0.771 | deleterious | None | None | None | None | N |
P/H | 0.2823 | likely_benign | 0.2532 | benign | -1.182 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.513532458 | None | None | N |
P/I | 0.3168 | likely_benign | 0.2501 | benign | -0.778 | Destabilizing | 0.952 | D | 0.813 | deleterious | None | None | None | None | N |
P/K | 0.3976 | ambiguous | 0.3693 | ambiguous | -1.07 | Destabilizing | 0.976 | D | 0.743 | deleterious | None | None | None | None | N |
P/L | 0.1809 | likely_benign | 0.1534 | benign | -0.778 | Destabilizing | 0.026 | N | 0.604 | neutral | N | 0.513278968 | None | None | N |
P/M | 0.3262 | likely_benign | 0.264 | benign | -0.511 | Destabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | N |
P/N | 0.5257 | ambiguous | 0.4741 | ambiguous | -0.785 | Destabilizing | 0.976 | D | 0.811 | deleterious | None | None | None | None | N |
P/Q | 0.1857 | likely_benign | 0.1574 | benign | -1.077 | Destabilizing | 0.988 | D | 0.751 | deleterious | None | None | None | None | N |
P/R | 0.2512 | likely_benign | 0.2322 | benign | -0.481 | Destabilizing | 0.984 | D | 0.812 | deleterious | N | 0.50361773 | None | None | N |
P/S | 0.1428 | likely_benign | 0.125 | benign | -1.188 | Destabilizing | 0.437 | N | 0.511 | neutral | N | 0.498530391 | None | None | N |
P/T | 0.163 | likely_benign | 0.1358 | benign | -1.154 | Destabilizing | 0.811 | D | 0.732 | prob.delet. | N | 0.501415684 | None | None | N |
P/V | 0.2344 | likely_benign | 0.1808 | benign | -0.936 | Destabilizing | 0.851 | D | 0.78 | deleterious | None | None | None | None | N |
P/W | 0.7512 | likely_pathogenic | 0.7029 | pathogenic | -1.403 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
P/Y | 0.5398 | ambiguous | 0.4786 | ambiguous | -1.129 | Destabilizing | 0.988 | D | 0.85 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.