Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32504 | 97735;97736;97737 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
N2AB | 30863 | 92812;92813;92814 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
N2A | 29936 | 90031;90032;90033 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
N2B | 23439 | 70540;70541;70542 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
Novex-1 | 23564 | 70915;70916;70917 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
Novex-2 | 23631 | 71116;71117;71118 | chr2:178541567;178541566;178541565 | chr2:179406294;179406293;179406292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs768612570 | -0.359 | 0.117 | N | 0.393 | 0.141 | 0.264081493735 | gnomAD-2.1.1 | 1.65E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.00827E-04 | None | 0 | 9.12E-06 | 0 |
E/K | rs768612570 | -0.359 | 0.117 | N | 0.393 | 0.141 | 0.264081493735 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.13565E-04 | 0 |
E/K | rs768612570 | -0.359 | 0.117 | N | 0.393 | 0.141 | 0.264081493735 | gnomAD-4.0.0 | 1.28914E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40974E-06 | 1.21898E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1249 | likely_benign | 0.1343 | benign | -0.644 | Destabilizing | 0.027 | N | 0.411 | neutral | N | 0.476634966 | None | None | N |
E/C | 0.6316 | likely_pathogenic | 0.6792 | pathogenic | -0.451 | Destabilizing | 0.935 | D | 0.585 | neutral | None | None | None | None | N |
E/D | 0.0891 | likely_benign | 0.0876 | benign | -0.823 | Destabilizing | None | N | 0.101 | neutral | N | 0.462609663 | None | None | N |
E/F | 0.6713 | likely_pathogenic | 0.7079 | pathogenic | 0.013 | Stabilizing | 0.791 | D | 0.593 | neutral | None | None | None | None | N |
E/G | 0.089 | likely_benign | 0.1052 | benign | -0.983 | Destabilizing | None | N | 0.3 | neutral | N | 0.395229878 | None | None | N |
E/H | 0.3191 | likely_benign | 0.351 | ambiguous | -0.079 | Destabilizing | 0.555 | D | 0.518 | neutral | None | None | None | None | N |
E/I | 0.3475 | ambiguous | 0.3776 | ambiguous | 0.272 | Stabilizing | 0.555 | D | 0.612 | neutral | None | None | None | None | N |
E/K | 0.1174 | likely_benign | 0.1439 | benign | -0.399 | Destabilizing | 0.117 | N | 0.393 | neutral | N | 0.489044116 | None | None | N |
E/L | 0.3288 | likely_benign | 0.3557 | ambiguous | 0.272 | Stabilizing | 0.149 | N | 0.611 | neutral | None | None | None | None | N |
E/M | 0.3886 | ambiguous | 0.4292 | ambiguous | 0.459 | Stabilizing | 0.935 | D | 0.583 | neutral | None | None | None | None | N |
E/N | 0.1582 | likely_benign | 0.1732 | benign | -0.899 | Destabilizing | 0.081 | N | 0.415 | neutral | None | None | None | None | N |
E/P | 0.4946 | ambiguous | 0.5622 | ambiguous | -0.012 | Destabilizing | 0.555 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.1178 | likely_benign | 0.1308 | benign | -0.758 | Destabilizing | 0.117 | N | 0.499 | neutral | N | 0.458894567 | None | None | N |
E/R | 0.1766 | likely_benign | 0.2117 | benign | -0.035 | Destabilizing | 0.38 | N | 0.527 | neutral | None | None | None | None | N |
E/S | 0.1254 | likely_benign | 0.1387 | benign | -1.154 | Destabilizing | 0.003 | N | 0.114 | neutral | None | None | None | None | N |
E/T | 0.1714 | likely_benign | 0.1887 | benign | -0.871 | Destabilizing | 0.081 | N | 0.502 | neutral | None | None | None | None | N |
E/V | 0.2089 | likely_benign | 0.2225 | benign | -0.012 | Destabilizing | 0.211 | N | 0.628 | neutral | N | 0.481368782 | None | None | N |
E/W | 0.7921 | likely_pathogenic | 0.8336 | pathogenic | 0.285 | Stabilizing | 0.935 | D | 0.635 | neutral | None | None | None | None | N |
E/Y | 0.4528 | ambiguous | 0.4942 | ambiguous | 0.265 | Stabilizing | 0.791 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.