Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32505 | 97738;97739;97740 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
N2AB | 30864 | 92815;92816;92817 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
N2A | 29937 | 90034;90035;90036 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
N2B | 23440 | 70543;70544;70545 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
Novex-1 | 23565 | 70918;70919;70920 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
Novex-2 | 23632 | 71119;71120;71121 | chr2:178541564;178541563;178541562 | chr2:179406291;179406290;179406289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs747569584 | 0.043 | 0.971 | N | 0.641 | 0.308 | 0.304760801415 | gnomAD-2.1.1 | 8.22E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.82E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.071 | likely_benign | 0.0736 | benign | -0.54 | Destabilizing | 0.489 | N | 0.457 | neutral | N | 0.414949002 | None | None | N |
T/C | 0.3212 | likely_benign | 0.3414 | ambiguous | -0.41 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
T/D | 0.1987 | likely_benign | 0.2234 | benign | 0.338 | Stabilizing | 0.956 | D | 0.577 | neutral | None | None | None | None | N |
T/E | 0.1797 | likely_benign | 0.2092 | benign | 0.331 | Stabilizing | 0.86 | D | 0.547 | neutral | None | None | None | None | N |
T/F | 0.1694 | likely_benign | 0.1956 | benign | -0.666 | Destabilizing | 0.978 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/G | 0.1774 | likely_benign | 0.1775 | benign | -0.766 | Destabilizing | 0.754 | D | 0.55 | neutral | None | None | None | None | N |
T/H | 0.1676 | likely_benign | 0.1819 | benign | -0.907 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/I | 0.1248 | likely_benign | 0.1553 | benign | -0.042 | Destabilizing | 0.971 | D | 0.641 | neutral | N | 0.439076656 | None | None | N |
T/K | 0.1384 | likely_benign | 0.1726 | benign | -0.446 | Destabilizing | 0.698 | D | 0.53 | neutral | N | 0.406137518 | None | None | N |
T/L | 0.0879 | likely_benign | 0.0987 | benign | -0.042 | Destabilizing | 0.86 | D | 0.531 | neutral | None | None | None | None | N |
T/M | 0.0775 | likely_benign | 0.0815 | benign | -0.096 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
T/N | 0.0725 | likely_benign | 0.0765 | benign | -0.336 | Destabilizing | 0.915 | D | 0.51 | neutral | None | None | None | None | N |
T/P | 0.0948 | likely_benign | 0.1101 | benign | -0.176 | Destabilizing | 0.971 | D | 0.644 | neutral | N | 0.40962054 | None | None | N |
T/Q | 0.1561 | likely_benign | 0.1721 | benign | -0.436 | Destabilizing | 0.956 | D | 0.651 | neutral | None | None | None | None | N |
T/R | 0.1269 | likely_benign | 0.1627 | benign | -0.248 | Destabilizing | 0.032 | N | 0.312 | neutral | N | 0.375526609 | None | None | N |
T/S | 0.0882 | likely_benign | 0.0891 | benign | -0.632 | Destabilizing | 0.058 | N | 0.33 | neutral | N | 0.397960752 | None | None | N |
T/V | 0.1037 | likely_benign | 0.1218 | benign | -0.176 | Destabilizing | 0.86 | D | 0.5 | neutral | None | None | None | None | N |
T/W | 0.4859 | ambiguous | 0.5253 | ambiguous | -0.65 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/Y | 0.1668 | likely_benign | 0.1886 | benign | -0.39 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.