Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3251897777;97778;97779 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
N2AB3087792854;92855;92856 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
N2A2995090073;90074;90075 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
N2B2345370582;70583;70584 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
Novex-12357870957;70958;70959 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
Novex-22364571158;71159;71160 chr2:178541525;178541524;178541523chr2:179406252;179406251;179406250
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-125
  • Domain position: 20
  • Structural Position: 22
  • Q(SASA): 0.128
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs1178885715 -1.722 0.17 N 0.367 0.128 0.465975295344 gnomAD-2.1.1 7.17E-06 None None None None N None 4.15E-05 0 None 0 0 None 0 None 0 7.85E-06 0
L/V rs1178885715 -1.722 0.17 N 0.367 0.128 0.465975295344 gnomAD-3.1.2 6.57E-06 None None None None N None 2.41E-05 0 0 0 0 None 0 0 0 0 0
L/V rs1178885715 -1.722 0.17 N 0.367 0.128 0.465975295344 gnomAD-4.0.0 6.19966E-06 None None None None N None 1.33522E-05 0 None 0 0 None 0 0 7.6308E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.779 likely_pathogenic 0.7282 pathogenic -2.65 Highly Destabilizing 0.953 D 0.675 neutral None None None None N
L/C 0.7505 likely_pathogenic 0.7319 pathogenic -1.586 Destabilizing 0.999 D 0.752 deleterious None None None None N
L/D 0.9975 likely_pathogenic 0.9973 pathogenic -3.359 Highly Destabilizing 0.998 D 0.911 deleterious None None None None N
L/E 0.9797 likely_pathogenic 0.9765 pathogenic -3.053 Highly Destabilizing 0.998 D 0.906 deleterious None None None None N
L/F 0.5093 ambiguous 0.4966 ambiguous -1.597 Destabilizing 0.982 D 0.692 prob.neutral D 0.526318612 None None N
L/G 0.9679 likely_pathogenic 0.9611 pathogenic -3.222 Highly Destabilizing 0.998 D 0.901 deleterious None None None None N
L/H 0.9595 likely_pathogenic 0.9549 pathogenic -2.948 Highly Destabilizing 0.999 D 0.872 deleterious D 0.554084105 None None N
L/I 0.0909 likely_benign 0.0917 benign -0.926 Destabilizing 0.046 N 0.353 neutral D 0.525279849 None None N
L/K 0.9736 likely_pathogenic 0.9741 pathogenic -1.987 Destabilizing 0.993 D 0.877 deleterious None None None None N
L/M 0.1729 likely_benign 0.1679 benign -0.972 Destabilizing 0.986 D 0.669 neutral None None None None N
L/N 0.9793 likely_pathogenic 0.9777 pathogenic -2.652 Highly Destabilizing 0.998 D 0.913 deleterious None None None None N
L/P 0.9911 likely_pathogenic 0.9899 pathogenic -1.492 Destabilizing 0.997 D 0.91 deleterious D 0.554084105 None None N
L/Q 0.9265 likely_pathogenic 0.9151 pathogenic -2.328 Highly Destabilizing 0.998 D 0.902 deleterious None None None None N
L/R 0.9592 likely_pathogenic 0.9537 pathogenic -2.006 Highly Destabilizing 0.997 D 0.897 deleterious D 0.554084105 None None N
L/S 0.955 likely_pathogenic 0.9437 pathogenic -3.152 Highly Destabilizing 0.993 D 0.869 deleterious None None None None N
L/T 0.8527 likely_pathogenic 0.8223 pathogenic -2.699 Highly Destabilizing 0.986 D 0.733 prob.delet. None None None None N
L/V 0.104 likely_benign 0.0903 benign -1.492 Destabilizing 0.17 N 0.367 neutral N 0.489374977 None None N
L/W 0.9412 likely_pathogenic 0.9338 pathogenic -2.054 Highly Destabilizing 0.999 D 0.825 deleterious None None None None N
L/Y 0.9212 likely_pathogenic 0.9201 pathogenic -1.813 Destabilizing 0.998 D 0.754 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.