Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32518 | 97777;97778;97779 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
N2AB | 30877 | 92854;92855;92856 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
N2A | 29950 | 90073;90074;90075 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
N2B | 23453 | 70582;70583;70584 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
Novex-1 | 23578 | 70957;70958;70959 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
Novex-2 | 23645 | 71158;71159;71160 | chr2:178541525;178541524;178541523 | chr2:179406252;179406251;179406250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1178885715 | -1.722 | 0.17 | N | 0.367 | 0.128 | 0.465975295344 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 4.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.85E-06 | 0 |
L/V | rs1178885715 | -1.722 | 0.17 | N | 0.367 | 0.128 | 0.465975295344 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1178885715 | -1.722 | 0.17 | N | 0.367 | 0.128 | 0.465975295344 | gnomAD-4.0.0 | 6.19966E-06 | None | None | None | None | N | None | 1.33522E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.6308E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.779 | likely_pathogenic | 0.7282 | pathogenic | -2.65 | Highly Destabilizing | 0.953 | D | 0.675 | neutral | None | None | None | None | N |
L/C | 0.7505 | likely_pathogenic | 0.7319 | pathogenic | -1.586 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
L/D | 0.9975 | likely_pathogenic | 0.9973 | pathogenic | -3.359 | Highly Destabilizing | 0.998 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9797 | likely_pathogenic | 0.9765 | pathogenic | -3.053 | Highly Destabilizing | 0.998 | D | 0.906 | deleterious | None | None | None | None | N |
L/F | 0.5093 | ambiguous | 0.4966 | ambiguous | -1.597 | Destabilizing | 0.982 | D | 0.692 | prob.neutral | D | 0.526318612 | None | None | N |
L/G | 0.9679 | likely_pathogenic | 0.9611 | pathogenic | -3.222 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
L/H | 0.9595 | likely_pathogenic | 0.9549 | pathogenic | -2.948 | Highly Destabilizing | 0.999 | D | 0.872 | deleterious | D | 0.554084105 | None | None | N |
L/I | 0.0909 | likely_benign | 0.0917 | benign | -0.926 | Destabilizing | 0.046 | N | 0.353 | neutral | D | 0.525279849 | None | None | N |
L/K | 0.9736 | likely_pathogenic | 0.9741 | pathogenic | -1.987 | Destabilizing | 0.993 | D | 0.877 | deleterious | None | None | None | None | N |
L/M | 0.1729 | likely_benign | 0.1679 | benign | -0.972 | Destabilizing | 0.986 | D | 0.669 | neutral | None | None | None | None | N |
L/N | 0.9793 | likely_pathogenic | 0.9777 | pathogenic | -2.652 | Highly Destabilizing | 0.998 | D | 0.913 | deleterious | None | None | None | None | N |
L/P | 0.9911 | likely_pathogenic | 0.9899 | pathogenic | -1.492 | Destabilizing | 0.997 | D | 0.91 | deleterious | D | 0.554084105 | None | None | N |
L/Q | 0.9265 | likely_pathogenic | 0.9151 | pathogenic | -2.328 | Highly Destabilizing | 0.998 | D | 0.902 | deleterious | None | None | None | None | N |
L/R | 0.9592 | likely_pathogenic | 0.9537 | pathogenic | -2.006 | Highly Destabilizing | 0.997 | D | 0.897 | deleterious | D | 0.554084105 | None | None | N |
L/S | 0.955 | likely_pathogenic | 0.9437 | pathogenic | -3.152 | Highly Destabilizing | 0.993 | D | 0.869 | deleterious | None | None | None | None | N |
L/T | 0.8527 | likely_pathogenic | 0.8223 | pathogenic | -2.699 | Highly Destabilizing | 0.986 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/V | 0.104 | likely_benign | 0.0903 | benign | -1.492 | Destabilizing | 0.17 | N | 0.367 | neutral | N | 0.489374977 | None | None | N |
L/W | 0.9412 | likely_pathogenic | 0.9338 | pathogenic | -2.054 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/Y | 0.9212 | likely_pathogenic | 0.9201 | pathogenic | -1.813 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.