Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32528 | 97807;97808;97809 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
N2AB | 30887 | 92884;92885;92886 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
N2A | 29960 | 90103;90104;90105 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
N2B | 23463 | 70612;70613;70614 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
Novex-1 | 23588 | 70987;70988;70989 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
Novex-2 | 23655 | 71188;71189;71190 | chr2:178541495;178541494;178541493 | chr2:179406222;179406221;179406220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.999 | N | 0.815 | 0.458 | 0.715157034389 | gnomAD-4.0.0 | 6.84387E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99632E-07 | 0 | 0 |
G/V | None | None | 0.999 | D | 0.799 | 0.423 | 0.81923583777 | gnomAD-4.0.0 | 1.36879E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31997E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3998 | ambiguous | 0.4263 | ambiguous | -0.153 | Destabilizing | 0.995 | D | 0.577 | neutral | N | 0.485744192 | None | None | I |
G/C | 0.4581 | ambiguous | 0.5188 | ambiguous | -0.82 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.529336216 | None | None | I |
G/D | 0.3103 | likely_benign | 0.4001 | ambiguous | -0.546 | Destabilizing | 0.604 | D | 0.569 | neutral | N | 0.505445063 | None | None | I |
G/E | 0.4476 | ambiguous | 0.5434 | ambiguous | -0.709 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | I |
G/F | 0.8157 | likely_pathogenic | 0.8388 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/H | 0.5886 | likely_pathogenic | 0.6485 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/I | 0.7757 | likely_pathogenic | 0.8135 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
G/K | 0.6068 | likely_pathogenic | 0.6784 | pathogenic | -0.466 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | I |
G/L | 0.7388 | likely_pathogenic | 0.7626 | pathogenic | -0.434 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | I |
G/M | 0.7857 | likely_pathogenic | 0.81 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/N | 0.4091 | ambiguous | 0.4513 | ambiguous | -0.203 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/P | 0.979 | likely_pathogenic | 0.982 | pathogenic | -0.316 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
G/Q | 0.5116 | ambiguous | 0.585 | pathogenic | -0.487 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
G/R | 0.4824 | ambiguous | 0.5515 | ambiguous | -0.071 | Destabilizing | 0.999 | D | 0.815 | deleterious | N | 0.498127682 | None | None | I |
G/S | 0.2106 | likely_benign | 0.2277 | benign | -0.318 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.487274675 | None | None | I |
G/T | 0.5539 | ambiguous | 0.585 | pathogenic | -0.42 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | I |
G/V | 0.7005 | likely_pathogenic | 0.7463 | pathogenic | -0.316 | Destabilizing | 0.999 | D | 0.799 | deleterious | D | 0.528322258 | None | None | I |
G/W | 0.7651 | likely_pathogenic | 0.8129 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/Y | 0.6829 | likely_pathogenic | 0.7264 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.