Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32530 | 97813;97814;97815 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
N2AB | 30889 | 92890;92891;92892 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
N2A | 29962 | 90109;90110;90111 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
N2B | 23465 | 70618;70619;70620 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
Novex-1 | 23590 | 70993;70994;70995 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
Novex-2 | 23657 | 71194;71195;71196 | chr2:178541489;178541488;178541487 | chr2:179406216;179406215;179406214 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.002 | N | 0.125 | 0.217 | 0.168933306366 | gnomAD-4.0.0 | 6.84375E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9962E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.119 | likely_benign | 0.1137 | benign | -0.145 | Destabilizing | 0.176 | N | 0.335 | neutral | None | None | None | None | I |
Q/C | 0.4917 | ambiguous | 0.4879 | ambiguous | 0.313 | Stabilizing | 0.995 | D | 0.453 | neutral | None | None | None | None | I |
Q/D | 0.2693 | likely_benign | 0.2507 | benign | -0.057 | Destabilizing | 0.495 | N | 0.321 | neutral | None | None | None | None | I |
Q/E | 0.0759 | likely_benign | 0.0748 | benign | -0.108 | Destabilizing | 0.425 | N | 0.313 | neutral | N | 0.366346979 | None | None | I |
Q/F | 0.5199 | ambiguous | 0.5181 | ambiguous | -0.477 | Destabilizing | 0.981 | D | 0.473 | neutral | None | None | None | None | I |
Q/G | 0.2313 | likely_benign | 0.2224 | benign | -0.296 | Destabilizing | 0.495 | N | 0.489 | neutral | None | None | None | None | I |
Q/H | 0.1559 | likely_benign | 0.1465 | benign | -0.295 | Destabilizing | 0.975 | D | 0.391 | neutral | N | 0.446330702 | None | None | I |
Q/I | 0.2665 | likely_benign | 0.2566 | benign | 0.159 | Stabilizing | 0.704 | D | 0.488 | neutral | None | None | None | None | I |
Q/K | 0.0875 | likely_benign | 0.0862 | benign | 0.168 | Stabilizing | 0.425 | N | 0.358 | neutral | N | 0.394843089 | None | None | I |
Q/L | 0.1088 | likely_benign | 0.104 | benign | 0.159 | Stabilizing | 0.425 | N | 0.485 | neutral | N | 0.443079753 | None | None | I |
Q/M | 0.261 | likely_benign | 0.2549 | benign | 0.484 | Stabilizing | 0.981 | D | 0.389 | neutral | None | None | None | None | I |
Q/N | 0.2048 | likely_benign | 0.1937 | benign | -0.043 | Destabilizing | 0.704 | D | 0.307 | neutral | None | None | None | None | I |
Q/P | 0.0776 | likely_benign | 0.074 | benign | 0.084 | Stabilizing | 0.002 | N | 0.125 | neutral | N | 0.292561296 | None | None | I |
Q/R | 0.0954 | likely_benign | 0.0943 | benign | 0.309 | Stabilizing | 0.784 | D | 0.347 | neutral | N | 0.376566759 | None | None | I |
Q/S | 0.1426 | likely_benign | 0.1412 | benign | -0.041 | Destabilizing | 0.037 | N | 0.089 | neutral | None | None | None | None | I |
Q/T | 0.1364 | likely_benign | 0.1295 | benign | 0.049 | Stabilizing | 0.013 | N | 0.123 | neutral | None | None | None | None | I |
Q/V | 0.1608 | likely_benign | 0.1544 | benign | 0.084 | Stabilizing | 0.495 | N | 0.495 | neutral | None | None | None | None | I |
Q/W | 0.4564 | ambiguous | 0.4729 | ambiguous | -0.494 | Destabilizing | 0.995 | D | 0.463 | neutral | None | None | None | None | I |
Q/Y | 0.3447 | ambiguous | 0.3479 | ambiguous | -0.214 | Destabilizing | 0.981 | D | 0.45 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.