Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3253897837;97838;97839 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
N2AB3089792914;92915;92916 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
N2A2997090133;90134;90135 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
N2B2347370642;70643;70644 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
Novex-12359871017;71018;71019 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
Novex-22366571218;71219;71220 chr2:178541465;178541464;178541463chr2:179406192;179406191;179406190
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-125
  • Domain position: 40
  • Structural Position: 42
  • Q(SASA): 0.1923
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs761050391 -1.608 1.0 N 0.873 0.47 0.434716162284 gnomAD-2.1.1 1.24785E-04 None None None None N None 0 5.81E-05 None 0 5.59E-05 None 8.51064E-04 None 0 1.78E-05 0
R/C rs761050391 -1.608 1.0 N 0.873 0.47 0.434716162284 gnomAD-3.1.2 3.29E-05 None None None None N None 0 6.55E-05 0 0 0 None 0 0 0 8.28157E-04 0
R/C rs761050391 -1.608 1.0 N 0.873 0.47 0.434716162284 gnomAD-4.0.0 5.45485E-05 None None None None N None 0 6.67089E-05 None 0 2.23015E-05 None 0 4.93421E-04 6.78214E-06 7.46826E-04 6.40677E-05
R/H rs3731749 -1.877 1.0 N 0.836 0.482 None gnomAD-2.1.1 1.71898E-01 None None None None N None 7.14108E-02 1.45161E-01 None 1.68765E-01 4.29855E-01 None 2.53193E-01 None 1.51237E-01 1.44664E-01 1.60231E-01
R/H rs3731749 -1.877 1.0 N 0.836 0.482 None gnomAD-3.1.2 1.41555E-01 None None None None N None 7.53709E-02 1.28015E-01 4.72588E-01 1.70317E-01 4.40411E-01 None 1.62656E-01 1.13924E-01 1.45474E-01 2.56841E-01 1.25958E-01
R/H rs3731749 -1.877 1.0 N 0.836 0.482 None 1000 genomes 2.09265E-01 None None None None N None 6.66E-02 1.484E-01 None None 4.514E-01 1.382E-01 None None None 2.689E-01 None
R/H rs3731749 -1.877 1.0 N 0.836 0.482 None gnomAD-4.0.0 1.52606E-01 None None None None N None 7.34376E-02 1.40731E-01 None 1.68007E-01 4.34368E-01 None 1.53036E-01 1.25372E-01 1.38994E-01 2.50687E-01 1.61359E-01
R/L rs3731749 None 1.0 N 0.831 0.468 0.367042808489 gnomAD-3.1.2 6.58E-06 None None None None N None 2.42E-05 0 0 0 0 None 0 0 0 0 0
R/L rs3731749 None 1.0 N 0.831 0.468 0.367042808489 gnomAD-4.0.0 6.58033E-06 None None None None N None 2.41616E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.9266 likely_pathogenic 0.9372 pathogenic -1.756 Destabilizing 0.999 D 0.701 prob.neutral None None None None N
R/C 0.3724 ambiguous 0.3975 ambiguous -1.64 Destabilizing 1.0 D 0.873 deleterious N 0.482481146 None None N
R/D 0.9894 likely_pathogenic 0.9904 pathogenic -0.678 Destabilizing 1.0 D 0.861 deleterious None None None None N
R/E 0.86 likely_pathogenic 0.8631 pathogenic -0.451 Destabilizing 0.999 D 0.712 prob.delet. None None None None N
R/F 0.9203 likely_pathogenic 0.9293 pathogenic -0.945 Destabilizing 1.0 D 0.887 deleterious None None None None N
R/G 0.875 likely_pathogenic 0.8788 pathogenic -2.143 Highly Destabilizing 1.0 D 0.831 deleterious N 0.478521581 None None N
R/H 0.3348 likely_benign 0.3343 benign -1.867 Destabilizing 1.0 D 0.836 deleterious N 0.472178479 None None N
R/I 0.7949 likely_pathogenic 0.8232 pathogenic -0.641 Destabilizing 1.0 D 0.886 deleterious None None None None N
R/K 0.2001 likely_benign 0.2144 benign -1.109 Destabilizing 0.998 D 0.623 neutral None None None None N
R/L 0.7717 likely_pathogenic 0.7956 pathogenic -0.641 Destabilizing 1.0 D 0.831 deleterious N 0.516265216 None None N
R/M 0.6911 likely_pathogenic 0.7332 pathogenic -1.119 Destabilizing 1.0 D 0.846 deleterious None None None None N
R/N 0.9663 likely_pathogenic 0.9701 pathogenic -1.133 Destabilizing 1.0 D 0.813 deleterious None None None None N
R/P 0.9984 likely_pathogenic 0.9987 pathogenic -0.999 Destabilizing 1.0 D 0.871 deleterious N 0.496879326 None None N
R/Q 0.2065 likely_benign 0.2057 benign -1.032 Destabilizing 1.0 D 0.821 deleterious None None None None N
R/S 0.9437 likely_pathogenic 0.9482 pathogenic -2.085 Highly Destabilizing 1.0 D 0.814 deleterious N 0.467645802 None None N
R/T 0.8534 likely_pathogenic 0.8723 pathogenic -1.627 Destabilizing 1.0 D 0.811 deleterious None None None None N
R/V 0.8374 likely_pathogenic 0.8559 pathogenic -0.999 Destabilizing 1.0 D 0.859 deleterious None None None None N
R/W 0.483 ambiguous 0.501 ambiguous -0.404 Destabilizing 1.0 D 0.845 deleterious None None None None N
R/Y 0.7582 likely_pathogenic 0.7728 pathogenic -0.26 Destabilizing 1.0 D 0.885 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.