Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32547 | 97864;97865;97866 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
N2AB | 30906 | 92941;92942;92943 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
N2A | 29979 | 90160;90161;90162 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
N2B | 23482 | 70669;70670;70671 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
Novex-1 | 23607 | 71044;71045;71046 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
Novex-2 | 23674 | 71245;71246;71247 | chr2:178541438;178541437;178541436 | chr2:179406165;179406164;179406163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1694457387 | None | 0.012 | N | 0.195 | 0.099 | 0.327952845175 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2657 | likely_benign | 0.289 | benign | -1.195 | Destabilizing | 0.625 | D | 0.352 | neutral | N | 0.505416291 | None | None | I |
V/C | 0.6891 | likely_pathogenic | 0.6759 | pathogenic | -0.792 | Destabilizing | 0.998 | D | 0.399 | neutral | None | None | None | None | I |
V/D | 0.5854 | likely_pathogenic | 0.6164 | pathogenic | -0.915 | Destabilizing | 0.989 | D | 0.437 | neutral | N | 0.507725877 | None | None | I |
V/E | 0.3853 | ambiguous | 0.4049 | ambiguous | -0.92 | Destabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | I |
V/F | 0.2015 | likely_benign | 0.218 | benign | -0.849 | Destabilizing | 0.934 | D | 0.399 | neutral | N | 0.506456441 | None | None | I |
V/G | 0.286 | likely_benign | 0.3055 | benign | -1.483 | Destabilizing | 0.966 | D | 0.41 | neutral | N | 0.471079296 | None | None | I |
V/H | 0.6038 | likely_pathogenic | 0.6096 | pathogenic | -0.937 | Destabilizing | 0.998 | D | 0.437 | neutral | None | None | None | None | I |
V/I | 0.0732 | likely_benign | 0.0738 | benign | -0.517 | Destabilizing | 0.012 | N | 0.195 | neutral | N | 0.424955352 | None | None | I |
V/K | 0.4913 | ambiguous | 0.5062 | ambiguous | -1.059 | Destabilizing | 0.974 | D | 0.403 | neutral | None | None | None | None | I |
V/L | 0.1671 | likely_benign | 0.181 | benign | -0.517 | Destabilizing | 0.005 | N | 0.135 | neutral | N | 0.465993898 | None | None | I |
V/M | 0.1353 | likely_benign | 0.1409 | benign | -0.459 | Destabilizing | 0.325 | N | 0.251 | neutral | None | None | None | None | I |
V/N | 0.3069 | likely_benign | 0.3092 | benign | -0.892 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | I |
V/P | 0.9345 | likely_pathogenic | 0.9456 | pathogenic | -0.708 | Destabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | I |
V/Q | 0.3264 | likely_benign | 0.3377 | benign | -1.047 | Destabilizing | 0.974 | D | 0.416 | neutral | None | None | None | None | I |
V/R | 0.4636 | ambiguous | 0.4745 | ambiguous | -0.528 | Destabilizing | 0.974 | D | 0.431 | neutral | None | None | None | None | I |
V/S | 0.2684 | likely_benign | 0.2785 | benign | -1.38 | Destabilizing | 0.974 | D | 0.372 | neutral | None | None | None | None | I |
V/T | 0.2304 | likely_benign | 0.2404 | benign | -1.281 | Destabilizing | 0.842 | D | 0.299 | neutral | None | None | None | None | I |
V/W | 0.8198 | likely_pathogenic | 0.8381 | pathogenic | -1.033 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | I |
V/Y | 0.5507 | ambiguous | 0.568 | pathogenic | -0.738 | Destabilizing | 0.991 | D | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.