Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32554 | 97885;97886;97887 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
N2AB | 30913 | 92962;92963;92964 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
N2A | 29986 | 90181;90182;90183 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
N2B | 23489 | 70690;70691;70692 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
Novex-1 | 23614 | 71065;71066;71067 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
Novex-2 | 23681 | 71266;71267;71268 | chr2:178541417;178541416;178541415 | chr2:179406144;179406143;179406142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.999 | N | 0.695 | 0.333 | 0.583991495718 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86026E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6283 | likely_pathogenic | 0.6215 | pathogenic | -1.696 | Destabilizing | 0.543 | D | 0.333 | neutral | N | 0.512342263 | None | None | N |
V/C | 0.8922 | likely_pathogenic | 0.8842 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/D | 0.9759 | likely_pathogenic | 0.9693 | pathogenic | -2.064 | Highly Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/E | 0.9324 | likely_pathogenic | 0.9195 | pathogenic | -1.844 | Destabilizing | 0.998 | D | 0.654 | neutral | N | 0.47249442 | None | None | N |
V/F | 0.6953 | likely_pathogenic | 0.6665 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/G | 0.8009 | likely_pathogenic | 0.7848 | pathogenic | -2.236 | Highly Destabilizing | 0.997 | D | 0.698 | prob.neutral | N | 0.492295065 | None | None | N |
V/H | 0.9791 | likely_pathogenic | 0.9754 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/I | 0.0879 | likely_benign | 0.0857 | benign | -0.202 | Destabilizing | 0.99 | D | 0.544 | neutral | None | None | None | None | N |
V/K | 0.9574 | likely_pathogenic | 0.9502 | pathogenic | -1.328 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
V/L | 0.3961 | ambiguous | 0.3863 | ambiguous | -0.202 | Destabilizing | 0.973 | D | 0.549 | neutral | N | 0.472293837 | None | None | N |
V/M | 0.3617 | ambiguous | 0.3639 | ambiguous | -0.237 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.485878642 | None | None | N |
V/N | 0.9098 | likely_pathogenic | 0.8999 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/P | 0.9805 | likely_pathogenic | 0.9747 | pathogenic | -0.671 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/Q | 0.9101 | likely_pathogenic | 0.9018 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/R | 0.938 | likely_pathogenic | 0.9302 | pathogenic | -1.278 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
V/S | 0.7947 | likely_pathogenic | 0.7824 | pathogenic | -2.252 | Highly Destabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
V/T | 0.6156 | likely_pathogenic | 0.6075 | pathogenic | -1.882 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
V/W | 0.9926 | likely_pathogenic | 0.9907 | pathogenic | -1.512 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
V/Y | 0.9613 | likely_pathogenic | 0.9562 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.