Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32556 | 97891;97892;97893 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
N2AB | 30915 | 92968;92969;92970 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
N2A | 29988 | 90187;90188;90189 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
N2B | 23491 | 70696;70697;70698 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
Novex-1 | 23616 | 71071;71072;71073 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
Novex-2 | 23683 | 71272;71273;71274 | chr2:178541411;178541410;178541409 | chr2:179406138;179406137;179406136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.985 | N | 0.487 | 0.321 | 0.683392867763 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
M/T | rs1257976666 | -0.863 | 0.994 | N | 0.526 | 0.49 | 0.7584815763 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
M/T | rs1257976666 | -0.863 | 0.994 | N | 0.526 | 0.49 | 0.7584815763 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4362E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3952 | ambiguous | 0.359 | ambiguous | -0.692 | Destabilizing | 0.989 | D | 0.509 | neutral | None | None | None | None | I |
M/C | 0.8177 | likely_pathogenic | 0.7838 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
M/D | 0.843 | likely_pathogenic | 0.8076 | pathogenic | 0.117 | Stabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
M/E | 0.5838 | likely_pathogenic | 0.5414 | ambiguous | 0.127 | Stabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | I |
M/F | 0.5576 | ambiguous | 0.5244 | ambiguous | -0.063 | Destabilizing | 0.999 | D | 0.462 | neutral | None | None | None | None | I |
M/G | 0.5975 | likely_pathogenic | 0.5702 | pathogenic | -0.919 | Destabilizing | 0.995 | D | 0.54 | neutral | None | None | None | None | I |
M/H | 0.6986 | likely_pathogenic | 0.6682 | pathogenic | 0.075 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
M/I | 0.7223 | likely_pathogenic | 0.6609 | pathogenic | -0.154 | Destabilizing | 0.985 | D | 0.487 | neutral | N | 0.460894723 | None | None | I |
M/K | 0.4038 | ambiguous | 0.3565 | ambiguous | 0.097 | Stabilizing | 0.994 | D | 0.527 | neutral | N | 0.41100462 | None | None | I |
M/L | 0.2269 | likely_benign | 0.2011 | benign | -0.154 | Destabilizing | 0.927 | D | 0.255 | neutral | N | 0.451467163 | None | None | I |
M/N | 0.6039 | likely_pathogenic | 0.5599 | ambiguous | 0.04 | Stabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
M/P | 0.9543 | likely_pathogenic | 0.9352 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
M/Q | 0.3086 | likely_benign | 0.2942 | benign | -0.013 | Destabilizing | 0.999 | D | 0.469 | neutral | None | None | None | None | I |
M/R | 0.4206 | ambiguous | 0.3907 | ambiguous | 0.549 | Stabilizing | 0.998 | D | 0.529 | neutral | N | 0.435246917 | None | None | I |
M/S | 0.4253 | ambiguous | 0.4022 | ambiguous | -0.444 | Destabilizing | 0.995 | D | 0.493 | neutral | None | None | None | None | I |
M/T | 0.3555 | ambiguous | 0.3104 | benign | -0.324 | Destabilizing | 0.994 | D | 0.526 | neutral | N | 0.407673526 | None | None | I |
M/V | 0.1622 | likely_benign | 0.1427 | benign | -0.306 | Destabilizing | 0.985 | D | 0.407 | neutral | N | 0.429918455 | None | None | I |
M/W | 0.8709 | likely_pathogenic | 0.8464 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
M/Y | 0.7565 | likely_pathogenic | 0.7297 | pathogenic | 0.038 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.