Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32559 | 97900;97901;97902 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
N2AB | 30918 | 92977;92978;92979 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
N2A | 29991 | 90196;90197;90198 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
N2B | 23494 | 70705;70706;70707 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
Novex-1 | 23619 | 71080;71081;71082 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
Novex-2 | 23686 | 71281;71282;71283 | chr2:178541402;178541401;178541400 | chr2:179406129;179406128;179406127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.776 | 0.488 | 0.574195325796 | gnomAD-4.0.0 | 1.59428E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77994E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.932 | likely_pathogenic | 0.9408 | pathogenic | -2.325 | Highly Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | I |
Y/C | 0.3177 | likely_benign | 0.3605 | ambiguous | -1.319 | Destabilizing | 1.0 | D | 0.776 | deleterious | N | 0.508787457 | None | None | I |
Y/D | 0.9661 | likely_pathogenic | 0.9695 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.778 | deleterious | D | 0.525017349 | None | None | I |
Y/E | 0.9772 | likely_pathogenic | 0.9784 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
Y/F | 0.0912 | likely_benign | 0.0866 | benign | -0.751 | Destabilizing | 0.434 | N | 0.353 | neutral | N | 0.441773031 | None | None | I |
Y/G | 0.9051 | likely_pathogenic | 0.9196 | pathogenic | -2.696 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
Y/H | 0.6581 | likely_pathogenic | 0.6638 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.527373218 | None | None | I |
Y/I | 0.7702 | likely_pathogenic | 0.7778 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
Y/K | 0.9678 | likely_pathogenic | 0.9647 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/L | 0.64 | likely_pathogenic | 0.6493 | pathogenic | -1.156 | Destabilizing | 0.994 | D | 0.469 | neutral | None | None | None | None | I |
Y/M | 0.8063 | likely_pathogenic | 0.8132 | pathogenic | -0.924 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Y/N | 0.8481 | likely_pathogenic | 0.8701 | pathogenic | -2.324 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.524763859 | None | None | I |
Y/P | 0.9971 | likely_pathogenic | 0.9974 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
Y/Q | 0.9343 | likely_pathogenic | 0.9381 | pathogenic | -2.095 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
Y/R | 0.9301 | likely_pathogenic | 0.93 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
Y/S | 0.8511 | likely_pathogenic | 0.8763 | pathogenic | -2.774 | Highly Destabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.498012324 | None | None | I |
Y/T | 0.9404 | likely_pathogenic | 0.9478 | pathogenic | -2.51 | Highly Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
Y/V | 0.7285 | likely_pathogenic | 0.7319 | pathogenic | -1.548 | Destabilizing | 0.997 | D | 0.594 | neutral | None | None | None | None | I |
Y/W | 0.6148 | likely_pathogenic | 0.6298 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.