Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3256 | 9991;9992;9993 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
N2AB | 3256 | 9991;9992;9993 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
N2A | 3256 | 9991;9992;9993 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
N2B | 3210 | 9853;9854;9855 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
Novex-1 | 3210 | 9853;9854;9855 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
Novex-2 | 3210 | 9853;9854;9855 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
Novex-3 | 3256 | 9991;9992;9993 | chr2:178764749;178764748;178764747 | chr2:179629476;179629475;179629474 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1322989995 | -1.198 | 1.0 | D | 0.723 | 0.548 | 0.360565625551 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs1322989995 | -1.198 | 1.0 | D | 0.723 | 0.548 | 0.360565625551 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7701 | likely_pathogenic | 0.8506 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
A/D | 0.992 | likely_pathogenic | 0.9976 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.708624963 | None | None | N |
A/E | 0.9781 | likely_pathogenic | 0.9916 | pathogenic | -1.504 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
A/F | 0.9196 | likely_pathogenic | 0.9636 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
A/G | 0.4589 | ambiguous | 0.592 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.6 | neutral | D | 0.669303304 | None | None | N |
A/H | 0.9885 | likely_pathogenic | 0.9956 | pathogenic | -1.749 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
A/I | 0.6662 | likely_pathogenic | 0.8054 | pathogenic | 0.446 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/K | 0.9926 | likely_pathogenic | 0.9974 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/L | 0.6327 | likely_pathogenic | 0.7711 | pathogenic | 0.446 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
A/M | 0.746 | likely_pathogenic | 0.8792 | pathogenic | 0.322 | Stabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
A/N | 0.9764 | likely_pathogenic | 0.9918 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
A/P | 0.9874 | likely_pathogenic | 0.9943 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.885 | deleterious | D | 0.686245778 | None | None | N |
A/Q | 0.9614 | likely_pathogenic | 0.982 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
A/R | 0.9764 | likely_pathogenic | 0.9898 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
A/S | 0.2836 | likely_benign | 0.398 | ambiguous | -1.641 | Destabilizing | 1.0 | D | 0.607 | neutral | D | 0.668792952 | None | None | N |
A/T | 0.3218 | likely_benign | 0.5286 | ambiguous | -1.325 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.577713214 | None | None | N |
A/V | 0.2964 | likely_benign | 0.4298 | ambiguous | 0.08 | Stabilizing | 1.0 | D | 0.631 | neutral | N | 0.459597053 | None | None | N |
A/W | 0.9952 | likely_pathogenic | 0.9985 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/Y | 0.9816 | likely_pathogenic | 0.9929 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.