Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32561 | 97906;97907;97908 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
N2AB | 30920 | 92983;92984;92985 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
N2A | 29993 | 90202;90203;90204 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
N2B | 23496 | 70711;70712;70713 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
Novex-1 | 23621 | 71086;71087;71088 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
Novex-2 | 23688 | 71287;71288;71289 | chr2:178541396;178541395;178541394 | chr2:179406123;179406122;179406121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.997 | N | 0.769 | 0.506 | 0.366466682447 | gnomAD-4.0.0 | 1.36989E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99996E-07 | 0 | 1.65887E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2481 | likely_benign | 0.2827 | benign | -0.689 | Destabilizing | 0.198 | N | 0.275 | neutral | N | 0.393285651 | None | None | N |
S/C | 0.3197 | likely_benign | 0.3137 | benign | -0.441 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.446426702 | None | None | N |
S/D | 0.9426 | likely_pathogenic | 0.9539 | pathogenic | -1.126 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/E | 0.9673 | likely_pathogenic | 0.9702 | pathogenic | -0.937 | Destabilizing | 0.992 | D | 0.646 | neutral | None | None | None | None | N |
S/F | 0.9342 | likely_pathogenic | 0.9512 | pathogenic | -0.497 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.43143582 | None | None | N |
S/G | 0.4604 | ambiguous | 0.5118 | ambiguous | -1.111 | Destabilizing | 0.923 | D | 0.665 | neutral | None | None | None | None | N |
S/H | 0.94 | likely_pathogenic | 0.9447 | pathogenic | -1.446 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/I | 0.7069 | likely_pathogenic | 0.7201 | pathogenic | 0.382 | Stabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
S/K | 0.9975 | likely_pathogenic | 0.9979 | pathogenic | -0.301 | Destabilizing | 0.983 | D | 0.647 | neutral | None | None | None | None | N |
S/L | 0.6636 | likely_pathogenic | 0.7001 | pathogenic | 0.382 | Stabilizing | 0.983 | D | 0.757 | deleterious | None | None | None | None | N |
S/M | 0.7637 | likely_pathogenic | 0.7714 | pathogenic | 0.384 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/N | 0.783 | likely_pathogenic | 0.8025 | pathogenic | -0.979 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/P | 0.9738 | likely_pathogenic | 0.9791 | pathogenic | 0.062 | Stabilizing | 0.997 | D | 0.769 | deleterious | N | 0.484040941 | None | None | N |
S/Q | 0.964 | likely_pathogenic | 0.9665 | pathogenic | -0.711 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
S/R | 0.9951 | likely_pathogenic | 0.9962 | pathogenic | -0.664 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
S/T | 0.1993 | likely_benign | 0.1963 | benign | -0.685 | Destabilizing | 0.978 | D | 0.643 | neutral | N | 0.453891392 | None | None | N |
S/V | 0.5508 | ambiguous | 0.5518 | ambiguous | 0.062 | Stabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
S/W | 0.9464 | likely_pathogenic | 0.955 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
S/Y | 0.8954 | likely_pathogenic | 0.9135 | pathogenic | -0.31 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.494641937 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.