Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32563 | 97912;97913;97914 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
N2AB | 30922 | 92989;92990;92991 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
N2A | 29995 | 90208;90209;90210 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
N2B | 23498 | 70717;70718;70719 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
Novex-1 | 23623 | 71092;71093;71094 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
Novex-2 | 23690 | 71293;71294;71295 | chr2:178541390;178541389;178541388 | chr2:179406117;179406116;179406115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1268910714 | 0.119 | 1.0 | N | 0.742 | 0.436 | 0.310458034454 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/D | rs1268910714 | 0.119 | 1.0 | N | 0.742 | 0.436 | 0.310458034454 | gnomAD-4.0.0 | 1.59747E-06 | None | None | None | None | N | None | 0 | 2.29716E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2345 | likely_benign | 0.2483 | benign | -0.212 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.504934403 | None | None | N |
G/C | 0.3404 | ambiguous | 0.3569 | ambiguous | -0.821 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.521343591 | None | None | N |
G/D | 0.3456 | ambiguous | 0.3824 | ambiguous | -0.058 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.499431681 | None | None | N |
G/E | 0.427 | ambiguous | 0.4673 | ambiguous | -0.213 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/F | 0.7282 | likely_pathogenic | 0.759 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/H | 0.553 | ambiguous | 0.5738 | pathogenic | -0.435 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
G/I | 0.638 | likely_pathogenic | 0.6792 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
G/K | 0.6952 | likely_pathogenic | 0.7153 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/L | 0.6151 | likely_pathogenic | 0.6361 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
G/M | 0.6244 | likely_pathogenic | 0.6489 | pathogenic | -0.42 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
G/N | 0.3168 | likely_benign | 0.3185 | benign | -0.214 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
G/P | 0.9444 | likely_pathogenic | 0.9578 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
G/Q | 0.4961 | ambiguous | 0.5176 | ambiguous | -0.454 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
G/R | 0.5442 | ambiguous | 0.5804 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.748 | deleterious | N | 0.47282727 | None | None | N |
G/S | 0.1458 | likely_benign | 0.1579 | benign | -0.43 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.472066801 | None | None | N |
G/T | 0.3206 | likely_benign | 0.3485 | ambiguous | -0.503 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/V | 0.4904 | ambiguous | 0.5479 | ambiguous | -0.274 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.521090101 | None | None | N |
G/W | 0.6406 | likely_pathogenic | 0.6998 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
G/Y | 0.6264 | likely_pathogenic | 0.6522 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.