Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32564 | 97915;97916;97917 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
N2AB | 30923 | 92992;92993;92994 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
N2A | 29996 | 90211;90212;90213 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
N2B | 23499 | 70720;70721;70722 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
Novex-1 | 23624 | 71095;71096;71097 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
Novex-2 | 23691 | 71296;71297;71298 | chr2:178541387;178541386;178541385 | chr2:179406114;179406113;179406112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.989 | D | 0.877 | 0.905 | 0.939919551497 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9636 | likely_pathogenic | 0.9715 | pathogenic | -2.329 | Highly Destabilizing | 0.895 | D | 0.824 | deleterious | None | None | None | None | N |
L/C | 0.9126 | likely_pathogenic | 0.9208 | pathogenic | -2.013 | Highly Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
L/D | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -2.283 | Highly Destabilizing | 0.997 | D | 0.886 | deleterious | None | None | None | None | N |
L/E | 0.9912 | likely_pathogenic | 0.994 | pathogenic | -2.206 | Highly Destabilizing | 0.992 | D | 0.882 | deleterious | None | None | None | None | N |
L/F | 0.7582 | likely_pathogenic | 0.7903 | pathogenic | -1.786 | Destabilizing | 0.978 | D | 0.885 | deleterious | D | 0.638509471 | None | None | N |
L/G | 0.9893 | likely_pathogenic | 0.9913 | pathogenic | -2.727 | Highly Destabilizing | 0.992 | D | 0.887 | deleterious | None | None | None | None | N |
L/H | 0.9777 | likely_pathogenic | 0.9839 | pathogenic | -1.892 | Destabilizing | 0.999 | D | 0.861 | deleterious | D | 0.6648548 | None | None | N |
L/I | 0.3088 | likely_benign | 0.3919 | ambiguous | -1.245 | Destabilizing | 0.688 | D | 0.835 | deleterious | D | 0.621248924 | None | None | N |
L/K | 0.9798 | likely_pathogenic | 0.9839 | pathogenic | -1.619 | Destabilizing | 0.992 | D | 0.878 | deleterious | None | None | None | None | N |
L/M | 0.4363 | ambiguous | 0.4529 | ambiguous | -1.159 | Destabilizing | 0.983 | D | 0.859 | deleterious | None | None | None | None | N |
L/N | 0.983 | likely_pathogenic | 0.9863 | pathogenic | -1.678 | Destabilizing | 0.997 | D | 0.881 | deleterious | None | None | None | None | N |
L/P | 0.9902 | likely_pathogenic | 0.9937 | pathogenic | -1.582 | Destabilizing | 0.996 | D | 0.888 | deleterious | D | 0.6648548 | None | None | N |
L/Q | 0.9585 | likely_pathogenic | 0.9688 | pathogenic | -1.826 | Destabilizing | 0.997 | D | 0.873 | deleterious | None | None | None | None | N |
L/R | 0.9651 | likely_pathogenic | 0.975 | pathogenic | -1.04 | Destabilizing | 0.989 | D | 0.877 | deleterious | D | 0.648603274 | None | None | N |
L/S | 0.9905 | likely_pathogenic | 0.9935 | pathogenic | -2.399 | Highly Destabilizing | 0.983 | D | 0.871 | deleterious | None | None | None | None | N |
L/T | 0.9656 | likely_pathogenic | 0.9757 | pathogenic | -2.192 | Highly Destabilizing | 0.983 | D | 0.86 | deleterious | None | None | None | None | N |
L/V | 0.4475 | ambiguous | 0.5372 | ambiguous | -1.582 | Destabilizing | 0.039 | N | 0.607 | neutral | D | 0.573765894 | None | None | N |
L/W | 0.9602 | likely_pathogenic | 0.9699 | pathogenic | -1.902 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
L/Y | 0.9666 | likely_pathogenic | 0.9698 | pathogenic | -1.662 | Destabilizing | 0.992 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.